Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3176 |
Symbol | |
ID | 3965610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4052102 |
End bp | 4052692 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637922273 |
Product | hypothetical protein |
Protein accession | YP_528645 |
Protein GI | 90022818 |
COG category | [S] Function unknown |
COG ID | [COG3117] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA ACGGCCTCTA CATTGCCTTT GTTGTCACCC TTGTTATTGG GCTGCTGTTT TATGGCGACT CACCAGAACA GCTTTTGGGT AGCGGGCAAG ATAAAAAAGC AGCCAAAATA TACCCTTATG CCATTGCTCA CCACGCCTCT ACGCGGCACT TCGCCAACGA CGGCACGCTC GATTACGAGT TTGTGGCCTC GCGCCTAGAG CACTACCAGC TTACGGAAGA TCAAGCGCCC GAAGACGAAA ATCGCGTGTA CACTCTTATC GACCTACCAG TGCTTACAAT CTTTCAGGGC GAGCAACCGT GGCGAGTAGA AGCTAAAAAA GGCAAGCTGC TTGGCGACGG TCAATCTATA GAGCTGTGGG AAGACGTTGT AATACGACAA AAGAATGAAA GCGGCACCTA CACCCAACTA ACGACAAATA AATTATTAAT ATTGCCGCAC GAAAAAGTCG CACAGACTGA AGAGACTGTT AAAATCAACT CCCCAAGGGG AGAAATGACA GGAGTCGGCA TGGTTGCCGA CCTCGCAGAA CGCAAAATCA CCCTGCTAGG TAAAGTAAGA GGCACGCATG ACCCAATCTA A
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Protein sequence | MLKNGLYIAF VVTLVIGLLF YGDSPEQLLG SGQDKKAAKI YPYAIAHHAS TRHFANDGTL DYEFVASRLE HYQLTEDQAP EDENRVYTLI DLPVLTIFQG EQPWRVEAKK GKLLGDGQSI ELWEDVVIRQ KNESGTYTQL TTNKLLILPH EKVAQTEETV KINSPRGEMT GVGMVADLAE RKITLLGKVR GTHDPI
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