Gene Sde_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3176 
Symbol 
ID3965610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4052102 
End bp4052692 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID637922273 
Producthypothetical protein 
Protein accessionYP_528645 
Protein GI90022818 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA ACGGCCTCTA CATTGCCTTT GTTGTCACCC TTGTTATTGG GCTGCTGTTT 
TATGGCGACT CACCAGAACA GCTTTTGGGT AGCGGGCAAG ATAAAAAAGC AGCCAAAATA
TACCCTTATG CCATTGCTCA CCACGCCTCT ACGCGGCACT TCGCCAACGA CGGCACGCTC
GATTACGAGT TTGTGGCCTC GCGCCTAGAG CACTACCAGC TTACGGAAGA TCAAGCGCCC
GAAGACGAAA ATCGCGTGTA CACTCTTATC GACCTACCAG TGCTTACAAT CTTTCAGGGC
GAGCAACCGT GGCGAGTAGA AGCTAAAAAA GGCAAGCTGC TTGGCGACGG TCAATCTATA
GAGCTGTGGG AAGACGTTGT AATACGACAA AAGAATGAAA GCGGCACCTA CACCCAACTA
ACGACAAATA AATTATTAAT ATTGCCGCAC GAAAAAGTCG CACAGACTGA AGAGACTGTT
AAAATCAACT CCCCAAGGGG AGAAATGACA GGAGTCGGCA TGGTTGCCGA CCTCGCAGAA
CGCAAAATCA CCCTGCTAGG TAAAGTAAGA GGCACGCATG ACCCAATCTA A
 
Protein sequence
MLKNGLYIAF VVTLVIGLLF YGDSPEQLLG SGQDKKAAKI YPYAIAHHAS TRHFANDGTL 
DYEFVASRLE HYQLTEDQAP EDENRVYTLI DLPVLTIFQG EQPWRVEAKK GKLLGDGQSI
ELWEDVVIRQ KNESGTYTQL TTNKLLILPH EKVAQTEETV KINSPRGEMT GVGMVADLAE
RKITLLGKVR GTHDPI