| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3175 |
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| Symbol | |
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| ID | 3965609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4051509 |
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| End bp | 4052036 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637922272 |
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| Product | HAD family hydrolase YedP |
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| Protein accession | YP_528644 |
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| Protein GI | 90022817 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCA ACGAAATTAT CGAAAAAGCC AAGAAAATAC GCCTGCTTTT ATTAGACGTA
GATGGCGTAC TCACCGATGG CAAACTCTAT TTCAACAACG ACGGCCAAGA AATGAAGGCG
TTTAATACCC TAGATGGCCA CGGTATAAAA GTTTTGCGCA AGTCTGGCGT TGAAGTGGGC
ATTATTACCG GCCGCGAGAG TGCATTGGTT TCGCGCAGAG CCAACGACCT AGGCATTAAA
TTAATTCGCC AAGGCAGAGA AGATAAGTTC GACGCCCTGC AAGAAATACT TAAGGAGTTT
CCCTGCGAAT TAGAGCATAT TGCCTATATG GGTGACGACT ACCCAGACCT ACTGGTAATG
ACCAAGGTAG GCCTTGCACT AACCGTCAAC AATGCAGTTA GCGCCGTTGC AGAGCGCGCC
CACTGGCGCA GTGAACGCCG CGGCGGCGAT GGTGCCGTGC GCGATGCCTG TGATTTTATT
ATGCGCGCCC AAAACACTTT TGACCAAACC CTTAGCCAAT ACCTTTAG
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| Protein sequence | MTSNEIIEKA KKIRLLLLDV DGVLTDGKLY FNNDGQEMKA FNTLDGHGIK VLRKSGVEVG
IITGRESALV SRRANDLGIK LIRQGREDKF DALQEILKEF PCELEHIAYM GDDYPDLLVM
TKVGLALTVN NAVSAVAERA HWRSERRGGD GAVRDACDFI MRAQNTFDQT LSQYL
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