| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3174 |
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| Symbol | |
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| ID | 3965608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4050496 |
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| End bp | 4051467 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637922271 |
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| Product | arabinose-5-phosphate isomerase |
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| Protein accession | YP_528643 |
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| Protein GI | 90022816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTT TTGATTTTAT TAAATCGGCG CAGCGCACCA TAAGCATGGA AGTCGCCGCC
GTAACAGCCA TGGCACAGCG CATAGACAGC AGCTTTAGCC AAGCCTGCGA GATTATTCTA
GCGTGCCAAG GGCGCACAGT GGTCACAGGC ATTGGTAAAT CGGGCCATAT AGCAAAAAAA
ATTGCGGCCT CTTTAGCCAG CACCGGCACC CCCGCATTTT TTGTGCACCC AGCAGAAGCT
AGCCACGGCG ACCTGGGCAT GATTACCTCA AATGATGTCG TTATTGCCCT TTCTAATTCG
GGCTCGTCGT CAGAGATGGT AGCCTTACTG CCCACGCTAA CCCGCGTGGG CGCCAAAATT
ATTAGCCTGT GCGGCAAAGC AGACTCGCCC CTCGCGCAAG CGGCCAATGT AAACTTAGAT
ATTTGGATAG AAAGCGAAGC CTGCCCACTC GATTTAGCCC CAACCTCTAG CACTACAGCA
TCGCTAGTAA TGGGCGACGC CCTTACTGTA GCCCTGCTAG AAGCCCGCGG CTTTAGCGCC
GAAGATTTTG CCTTTCGCCA CCCCGGCGGC ACCCTTGGCC GAAAACTCCT GCTGCGCGTA
TCCGACGTAA TGCATGCTGG CGATCAAGTA CCCAAAATTC ATCGCGCGGC ATCACTGGGT
GAAACCCTAA GCATGATGAC CGCCAAAGGG TTTGGCATGA CCGCCGTGAT GGACGATAGC
GATAAGCTTG TTGGCATATT CACCGACGGC GACCTGCGCC GCTGCGTAGA TAAGGGCATA
AACATTGGCA GCGCTATTGT GGGCGATGTA ATGACTCCCA ACCCGCGCAC AGTGCAAAGC
CGCATGCTGG CTGCACAAGC GCTGAACTTG ATGGAAACAA ATAAAATAAC CGCGTTAATC
GTAGAAGACG AGAACCAAAA GGCAGTTGGC GTACTCCATA TGCACGACCT GCTGCGCGCA
GGCTTGGTGT AA
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| Protein sequence | MSTFDFIKSA QRTISMEVAA VTAMAQRIDS SFSQACEIIL ACQGRTVVTG IGKSGHIAKK
IAASLASTGT PAFFVHPAEA SHGDLGMITS NDVVIALSNS GSSSEMVALL PTLTRVGAKI
ISLCGKADSP LAQAANVNLD IWIESEACPL DLAPTSSTTA SLVMGDALTV ALLEARGFSA
EDFAFRHPGG TLGRKLLLRV SDVMHAGDQV PKIHRAASLG ETLSMMTAKG FGMTAVMDDS
DKLVGIFTDG DLRRCVDKGI NIGSAIVGDV MTPNPRTVQS RMLAAQALNL METNKITALI
VEDENQKAVG VLHMHDLLRA GLV
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