| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3170 |
|---|
| Symbol | |
|---|
| ID | 3965604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 4046757 |
|---|
| End bp | 4048019 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637922267 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_528639 |
|---|
| Protein GI | 90022812 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.77474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAT TAATAATTGA AGGTGGCTCG CGCATCAATG GCGAGATTCG TATTTCTGGC
TCGAAAAACT CGGGGTTGCC CATATTGGCG GCCACCTTGC TAGCCAGTGG GCCAATGCAT
ATATGCAACC TTCCACATTT AAACGACATT ACCACCATGC TGGCACTTTT GCGTTGCATG
GGGGTTGGGG TAACCATCGA CGAGAAAATG TGCGTCGAGG TAGACCCTAC CAGTATTACT
GAATTTGAGG CGCCCTATGA GTTGGTGCGC ACCATGCGCG CGTCCATCCT CGTGTTGGGG
CCAATGCTGG CACGCTTTGG CAAGGCTGAT GTGTCTTTCC CAGGTGGTTG CGCCATTGGT
AGCCGACCTG TGGATATTCA CTTGCGTGGT CTAGAGGCCA TGGGGGCCGA AATTGAAGTT
GATGGTGGTT ACATTCGCGC TAAAGCGCCC AATGGCTTAA AAGGCGCACG CTATTTAATG
GATACCGTTA CCGTGGGTGG TACCGAAAAC CTATTGATGG CTGCAGTGCT GGCAGAGGGC
ACCACCATTT TAGAAAATGC GGCCAGAGAG CCCGAAATTG TTGATTTGGC AGAGTGCCTT
ATTGCAATGG GGGCAAAAAT TAAAGGCGTA GGTACCGATC GCTTAGAAAT TGAAGGCGTT
AAAACCTTGA ACGGTTGCAC CTATGAAGTC ATGCCAGACC GTATTGAGAC CGGCACCTAC
TTGGTTGCAG CGGCAGCCAC TGGCGGTTGG GTTAAGTTGC GCGATACGCG CGCGGATATT
CTCGAAGCCG TTTTGCTTAA GCTTGAAGAG GCGGGGGCAG AAATTACTGT TGGCGAAGGC
ACTATCGAGC TGGCTATGCA CGGCAAGCGG CCAAAGGCGG TTAGTTTTAA AACTGCGCCT
TACCCTGCTT TTCCTACCGA TATGCAGGCG CAGTTCACCG CAATGAATGC CATTGCTGAA
GGCACTTCGT CGGTAGTAGA AACTATTTTC GAAAATCGTT TAATACAAGT ACACGAACTT
AATCGCATGG GCGCTAATAT TCGCCTTGAA GGCAATACGG CCATTATTAC TGGTGTTGAA
AAGCTTAAAG CTGCACCGGT TATGGCTTCC GATTTGCGCG CGTCTGCGAG TTTGGTTATT
GCGGGAATGT TGGCCGAGGG CGATACCCTT GTGGATCGCA TTTACCATAT CGACCGTGGT
TACGAATGTA TTGAAGAGAA ATTGCAGGCG TTGGGTGTTC GCATTCGGCG CGTTCCTGGT
TAA
|
|---|
| Protein sequence | MDKLIIEGGS RINGEIRISG SKNSGLPILA ATLLASGPMH ICNLPHLNDI TTMLALLRCM
GVGVTIDEKM CVEVDPTSIT EFEAPYELVR TMRASILVLG PMLARFGKAD VSFPGGCAIG
SRPVDIHLRG LEAMGAEIEV DGGYIRAKAP NGLKGARYLM DTVTVGGTEN LLMAAVLAEG
TTILENAARE PEIVDLAECL IAMGAKIKGV GTDRLEIEGV KTLNGCTYEV MPDRIETGTY
LVAAAATGGW VKLRDTRADI LEAVLLKLEE AGAEITVGEG TIELAMHGKR PKAVSFKTAP
YPAFPTDMQA QFTAMNAIAE GTSSVVETIF ENRLIQVHEL NRMGANIRLE GNTAIITGVE
KLKAAPVMAS DLRASASLVI AGMLAEGDTL VDRIYHIDRG YECIEEKLQA LGVRIRRVPG
|
|---|
| |