Gene Sde_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3166 
Symbol 
ID3965600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4042913 
End bp4043371 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content45% 
IMG OID637922263 
Producthypothetical protein 
Protein accessionYP_528635 
Protein GI90022808 
COG category[S] Function unknown 
COG ID[COG3105] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGTG CTATTGTTTT ATGTATTGGC GGCTTAATAG GCGCTGTTAT CAGCCGCAAA 
TTTATTCCAC CAGAGCACCA AAAAGAACTG GAGACAAACC TTCAGGCGGC ACGTGAAGAC
TTAAAGCAAT ATCAACAGGA TGTAGCGCAA CACTTTGAAG AAACTTCTCG CTTGGTACAC
AACCTCACTC AAAGTTACAA AGAGGTTCAC GAACATTTAG CTAAAGGCGC TATTCACCTA
ACCAACTCAG ATATTAGCCG CCAAATGCTT GAAGCTGGCG ATGGCAATAT TGGTGTTGAG
GCTGGCGCAC TGTTAGCCGA AACCACTGTA CTGCCGCCAC GCGACTGGGC ACCAAAAACC
CCAGGGCAAA AAGGCACATT AAGTGAAGAG TTTGGCTTGC TTGATGAAGC CGAAGCAGAA
AACGCAGAAA AACCTAAAGA GGAAAAAGAA ATAAACTGA
 
Protein sequence
MVGAIVLCIG GLIGAVISRK FIPPEHQKEL ETNLQAARED LKQYQQDVAQ HFEETSRLVH 
NLTQSYKEVH EHLAKGAIHL TNSDISRQML EAGDGNIGVE AGALLAETTV LPPRDWAPKT
PGQKGTLSEE FGLLDEAEAE NAEKPKEEKE IN