Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3161 |
Symbol | |
ID | 3965595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4037279 |
End bp | 4039522 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637922258 |
Product | glutamyl-tRNA(Gln) amidotransferase A subunit |
Protein accession | YP_528630 |
Protein GI | 90022803 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex [COG2857] Cytochrome c1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.389145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAATT GGCTTGCTGG TTTATGGGGT TGGATAGACG AACGTCTACC CGTGCAGCGT GCATGGGATA CCCACATGGG CAAATACTAT GCCCCTAAGA ATTTTAACTT TTGGTACTTC TTTGGTGTGC TTTCTCTTTT AGTGCTGGTT AACCAGTTGC TAACGGGTAT TTGGCTCACT ATGAATTACG TTCCTTCTGC CGAAGAGGCG TTTGCCTCTG TAGAATACAT CATGCGCGAT GTGCCCTACG GCGATACCCT ACGCTATTTG CACTCCACTG GTGCCTCTGC GTTCTTTATT GTCGTATACC TGCATATGTT CCGCGGTTTG ATGTACGGCT CTTACCGCGC GCCACGCGAG TTGGTGTGGA TTTTCGGTAT GTTTATCTAC GTTGCACTTA TGGCCGAAGC CTTCTTGGGT TACGTTCTAC CTTGGGGGCA AATGTCTTAC TGGGGTGCAC AGGTAATTGT TAACCTGTTT GGTGCTATAC CATACGTAGG TGAAGACCTA GTGCAATGGA TTCGCGGCGA CTACCTCATA TCTGGTGCAA CCTTAAACCG CTTCTTCGCC TTACACGTTG TGGCTATCCC CATTGTGTTG CTTGCATTGG TTGTATTGCA TATTTTGGCG TTGCACGAAG TGGGTTCTAA CAACCCAGAC GGCGTAGAAA TTAAGAAAAA CAAAGATGAA AACGGTATTC CGCTAGACGG CATTCCTTTC CATCCTTACT ACACCGTGCA CGATTTGGTG GGTATAACTG TCTTCTTGTT TGCATTCTGT GGTGTTGTGT TCTTCGCGCC AGAAATGGGC GGTATGTTCT TAGAGCACGC AAACTTCGAG CAGGCGAACG GCCTTAAAAC TCCTGAGCAC ATTGCTCCGG TTTGGTACTT CACACCATTC TATGCGGTAC TGCGTGCAGT AACGTTCGAT TTGGGTGGCG TGTTTACCTC TAAGCTGCTT GGCTTTGTTG CAATGGCCGC TGCCATTGTG GTGCTTTTCT TCCTGCCTTG GTTGGATAAA GCAAAATCGA AGTCTGTGCG TTACAAAGGT ATGTTGCCAA AAGTAATGCT AATTAAGTTT GCAGCATGCT TCGTAATTTT GGGTGTGTTA GGTCTTAAGT CACCTACTGT AGAACGTACT TTGCTCGCGC AAATTAGCAC TCTGTTCTAT TTTGCATTCT TCTTCAGTAT GCCTACTTGG ACCAGTGCTG GCAGAAAGAG CTTCTTTGGT ATTGTTATTT GTATAGCGTT CGCCATATGG ACAGCTTACG TTTCTGCGGT AACCTTAATA AGCTCTATGC ATGCGGCAGA AGGTTCTGGG CACGGTGTAA ACTTGTTTGC ATACATCTAC GGCTTTGCAG TAGCGGCGTT TATTGCAGCT ATTCCATGGT TGGCGGCTCG AGATGCAGAA ACACCAGTAC CTGAACGCGT TCAAATGAAA GGCCTAAACC CAGTGTTGGT TTGGGGTGGT TTGATTCTGT TCTTGGCACT TGCTTTTGTT CCATTAAAAG CAATTGGTGC CGAAGGCGGT GCTTGTGGCA CTGCAGCGTG TGAGCACTTT GAAGCGGATG TTTCCGATAA AGAGTCATTG CAGCGCGGCG CTCAAGTATT TATGAACTTC TGCATGGGCT GTCACTCTGC CAACTACTCT CGCTACGAGC GTGTTGCAGA TGACTTAGGC ATCCCGCATC AATTAATGCT AGATAACTTA GTTTTTTCTG ATCAAAAGAT AGGTTCATTA ATGAAAATAT CGATGACCCC AGAAAAATCT AAGCAGTGGT TTGGTGCTAC GCCTCCCGAT TTATCGCTAG TTACACGTGC TCGTTCCTCT GAGTGGGTGT ACAACTTCTT AATCAACTTT TACAAAGACG ATTCACGTCC AACAGGCGTT AACAACAAAG TTTTCGCTAA CGTGGGTATG CCTCATGTGT TGATGGAGTT GCAGGGCTTG GCCGAGTGCG CGCCAGGGCC AAAACTAGAT AGCCATGGCA AAGTAGTACG CGACCATTTG GGTGATACCA AAAACGCCCC TTGCGGTTCG TTGGTTGTAG GTAGTGAAAA GGGCACGTTG AATGATGAGG AATACAAATC TACTGTTTAC GATTTGGTTA ACTTCCTTAC TTATGTTGCC GAGCCTGGCG CAGAAAAGCG CAAGAAAACT GGTATATTTG TATTTTTATT CTTAGGCGTA TTGTTGGTGT TCACTTGGTT ACTAAACCGT GAATACTGGA AAGACGTACA CTAA
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Protein sequence | MTNWLAGLWG WIDERLPVQR AWDTHMGKYY APKNFNFWYF FGVLSLLVLV NQLLTGIWLT MNYVPSAEEA FASVEYIMRD VPYGDTLRYL HSTGASAFFI VVYLHMFRGL MYGSYRAPRE LVWIFGMFIY VALMAEAFLG YVLPWGQMSY WGAQVIVNLF GAIPYVGEDL VQWIRGDYLI SGATLNRFFA LHVVAIPIVL LALVVLHILA LHEVGSNNPD GVEIKKNKDE NGIPLDGIPF HPYYTVHDLV GITVFLFAFC GVVFFAPEMG GMFLEHANFE QANGLKTPEH IAPVWYFTPF YAVLRAVTFD LGGVFTSKLL GFVAMAAAIV VLFFLPWLDK AKSKSVRYKG MLPKVMLIKF AACFVILGVL GLKSPTVERT LLAQISTLFY FAFFFSMPTW TSAGRKSFFG IVICIAFAIW TAYVSAVTLI SSMHAAEGSG HGVNLFAYIY GFAVAAFIAA IPWLAARDAE TPVPERVQMK GLNPVLVWGG LILFLALAFV PLKAIGAEGG ACGTAACEHF EADVSDKESL QRGAQVFMNF CMGCHSANYS RYERVADDLG IPHQLMLDNL VFSDQKIGSL MKISMTPEKS KQWFGATPPD LSLVTRARSS EWVYNFLINF YKDDSRPTGV NNKVFANVGM PHVLMELQGL AECAPGPKLD SHGKVVRDHL GDTKNAPCGS LVVGSEKGTL NDEEYKSTVY DLVNFLTYVA EPGAEKRKKT GIFVFLFLGV LLVFTWLLNR EYWKDVH
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