Gene Sde_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3159 
Symbol 
ID3965593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4036103 
End bp4036504 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content47% 
IMG OID637922256 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_528628 
Protein GI90022801 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CATCCAATCG TCCCTACATG ATTAGGGCTT TGTACGAATG GATTTTGGAT 
AATGATTTTA CGCCGCATCT GGTGGTGTTT GCCCATGCGC CAAATGTCGA AGTACCGCAA
GAATATGTAA ACAAAGATGG GCAAATTGTT CTTAATATCG CTCCTCGTGC AGTTGAAGGC
TTAGACCTTG GTAACAAGGC GATAAGCTTT CAGGCTCGTT TTGGTGGTGT GCCTACTCAC
CTTTATGTGC CCTGTCAGGC TGTATTGGGT ATTTATGCTC GTGAAAATGG TCAGGGAATG
ATGTTTGACT TAGAGTCAAA CCCCGAGCCA GATCCAGATC CCGCGCCTGT AGAGCCCGAT
CCAAAGTCAG CAAAGCGCCC AAGCTTGCGT GTGGTTAAAT AA
 
Protein sequence
MTMTSNRPYM IRALYEWILD NDFTPHLVVF AHAPNVEVPQ EYVNKDGQIV LNIAPRAVEG 
LDLGNKAISF QARFGGVPTH LYVPCQAVLG IYARENGQGM MFDLESNPEP DPDPAPVEPD
PKSAKRPSLR VVK