Gene Sde_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3158 
Symbol 
ID3965592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4035214 
End bp4035831 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content46% 
IMG OID637922255 
Productrod shape-determining protein MreC, subtype 
Protein accessionYP_528627 
Protein GI90022800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGT TAGATCACAC CTTAGGTATT ATGACCCACC CAGATGAAGA GTGGGCTGCC 
ATCAAAAAAC AAAAGAGCTC GTTTAGACAA GTCTTCTTGA GCCATGTACC TTTTTTAGCT
GCTATCCCAG CGGTGGCTTC CTTTTTTGGG TTAACCCAAG TTGGTTGGAC CATTGGCGAT
GGCGCTGCGG TAAAGCTAAC CGTTAACAGC GCGCTTTCGC TGTGTGCGTT AACCTATGTG
GCACTACTCG CGGGTGTTTA TATCCTTGGG GAATTCATTA ATTGGATGGC AAAAACTTAT
GGGGTAGATG GCAGCGAAGA GCGACGTCAT TACGCTGGTA CGGCCATGGC TGTATACATC
ACAACGCCAC TTATGTTGGC TGGCGCCGTT ACTGCATACC CTATGCTTTG GTTAGATGCC
ATTGTCATTA TGGCTGCAGC GACTTACTCG GTGTATTTAA TTTACGAGGG CGTGCCTATT
TTGATGAGCT TAGATAAAGA TCGCGCCTTT ATGTATTCAT CTTCGATTGT AACGGTTGGT
TTGGTGCTAA TGGTTACCGC TATGATAGCT ACCGTAATTA TTTGGGGTAT GGGTTTAGGT
CCAGTGTTCG CCGATTAA
 
Protein sequence
MALLDHTLGI MTHPDEEWAA IKKQKSSFRQ VFLSHVPFLA AIPAVASFFG LTQVGWTIGD 
GAAVKLTVNS ALSLCALTYV ALLAGVYILG EFINWMAKTY GVDGSEERRH YAGTAMAVYI
TTPLMLAGAV TAYPMLWLDA IVIMAAATYS VYLIYEGVPI LMSLDKDRAF MYSSSIVTVG
LVLMVTAMIA TVIIWGMGLG PVFAD