Gene Sde_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3157 
Symbol 
ID3965591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4034016 
End bp4035050 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content47% 
IMG OID637922254 
Productesterase/lipase-like 
Protein accessionYP_528626 
Protein GI90022799 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTTTAT CTTTGTCACT ATTAGAGCTT GGTAAGCGCC TTGTTTTTAT GTGGTTGATT 
ACAACAAGTG TGATGGTTGC AGCTGCCGAA AGTACCAATC AATATGCTAA TCAATACACC
ATTGAAAACA CCTTTAACAA ACTGGTAAAA AATTACCCGC TTATTGAAAT GGGTAGGTTA
GATATACCAG AAGGTGTTAG TGGCTCTAAA GAAATTACCT ATAAAATAGT GGCAGGCGAA
CGCTTAGCCC TCGATGTGTA TTGGCCCAGC CAAGCGCAGG CTGAACAATT ACCCGCTATT
TTGTTGGTGC ACGGTGGTGG TTGGTGGCAA GGCTATAGAG AAAACATGGC GCCACTCGCA
ATAAAGCTCG CCGAGCGCGG GGTGGTAGCC GTTACAGTTT CTTACCGTTT AGCCGGTACG
GCGAAGTACC CTGCGGCTAT TCACGATGTG CGCGACGCAC TGGATTGGTT GTTTGATAAC
GCCGCAGATT ACAAGGTAGA TCGGTCGCGC ATTGCGCTGG GCGGGGCTTC TGCCGGCGGT
CAAATTGCCG CGTTAACCGC ACTTACCTTT GGCGACAAAA ATTTAGACGG CCACCCAGCA
CAGGATGGAA GAATGCAGGG TGTGTACGCA ATTGTGAATG TAGATGGCTT ATCTGATTTC
ACTACGCCAT TGGCGCTCAA GCATGAGAAC GATCCTGCTA AAAAACCTTC CTCTGCTGAG
CGTTGGTTTG GAGGGCGCTA TGAAGAAAAG ACTGCGTTGT GGCAGCAAGG CTCGCCAATC
AATTATGTGG CTGAGCATTC GCCGCCTATT TTGTTTTTAA ATAGTAGTCG TGAGCGTTTT
AGTGCGGGGC AACAGGACTA TATCAATAAA TATGTTGCCA TAGGTGGTTG CGCATCGTCG
TATAAGTTTG AAGACTCGCC GCATTCCTAT TGGTTGTTTG AACCTTGGAT TACGCCTACC
GCGAATATTA TCGCTGCGTT TTTAACTGGT ACAGAAAATA AACTCGAACA ACCACTCGCC
GTTCATTGTC ATTAA
 
Protein sequence
MPLSLSLLEL GKRLVFMWLI TTSVMVAAAE STNQYANQYT IENTFNKLVK NYPLIEMGRL 
DIPEGVSGSK EITYKIVAGE RLALDVYWPS QAQAEQLPAI LLVHGGGWWQ GYRENMAPLA
IKLAERGVVA VTVSYRLAGT AKYPAAIHDV RDALDWLFDN AADYKVDRSR IALGGASAGG
QIAALTALTF GDKNLDGHPA QDGRMQGVYA IVNVDGLSDF TTPLALKHEN DPAKKPSSAE
RWFGGRYEEK TALWQQGSPI NYVAEHSPPI LFLNSSRERF SAGQQDYINK YVAIGGCASS
YKFEDSPHSY WLFEPWITPT ANIIAAFLTG TENKLEQPLA VHCH