| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3153 |
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| Symbol | |
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| ID | 3965587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4029857 |
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| End bp | 4030951 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922250 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_528622 |
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| Protein GI | 90022795 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGCGC ACCTAAGCTT AAGATTTTTT CTGTTATATC TTCTACTTAA AGCTTTGAAC
TTTGGCTTTG AATGGTTGCT AGTGAACCCC GATACCCCCT ACAAAGCCGC ATGGCTGGCT
TTGCTTATGG CCAGTTCATT TTTGATGGCG CCGTGCGTGT GGTTGCTTGC ACGGGAAATT
GATCGCAATG CGCCACCGCG CTTATGGCCA ATTGCCTGGG GCCAATGCGC GGTTGTATTG
GCGGGCTTTA TATTATGTAT ACCGCTATTT TTGGCAGCCA ATCAAAGCGT TTTGCTAGTA
GATCCATCCC GTGCGAAACC CCACTGGTTC AATCTCACCC ATACCACCAT GGTAGGCGCA
GTATTGCTTT ATCTCGTCCA AGTCCCCTGG TATTTATCGC GCAGCGTAAG CCTATTTCGC
GAACGCCTAC GCATTAACAA GTTTTTATTT TCTAACATTG ATGAGCCGGC CCTTAACGCT
TTGCGCGCTT TAATTTGGGT TATGGCTGCA AGCTGGCTGT TTAACTTACT ACGCATGCTG
CATACGATGA TTTTAGAGCC ATCACAAGTA TGGAACCTGC TAATAAGCGC CTGTGAAATA
GGGGTAACCA TTACGGCGCT GTACGTTATT TTTAAACGCT GTTGGCAATA CAGTGTTGAC
GATCAAACTA TGGTTGAATC CGTAAGCCCC GAGCTAAAAG AACAGGCTTC GCTCCTACAG
GGCGACAAGT GCGCCAAGTA CGCCAAGTCG TCGCTTGATC AAACTACACG AACTCGGGTA
GCTAAAAAGA TTCTAGCTCA GTTTGAAGAA GAGAAAATAT ACCGTAAGAA TGGCCTAAAG
CTGCAAGATT TATGCGTTGC CACAAATGAG AGCGCCCACT ATATATCACA GGTAATAAAC
CAAGAGCTGG GGTTCAGCTT TTTTGATTTA GTGAACAAAT ATCGAATTGA AGAGGCACAA
CAGAAGCTAA AACAAAATCG CGACCTACCT ATTTTAGATA TTGCCCTAGA GGTTGGGTTT
AATTCGAAAC CTACTTTTAA TAAAGCCTTT AAACTGCGAG TTGGGCAAAC ACCCAGTGAA
TTCCGAGCAA AGTAG
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| Protein sequence | MFAHLSLRFF LLYLLLKALN FGFEWLLVNP DTPYKAAWLA LLMASSFLMA PCVWLLAREI
DRNAPPRLWP IAWGQCAVVL AGFILCIPLF LAANQSVLLV DPSRAKPHWF NLTHTTMVGA
VLLYLVQVPW YLSRSVSLFR ERLRINKFLF SNIDEPALNA LRALIWVMAA SWLFNLLRML
HTMILEPSQV WNLLISACEI GVTITALYVI FKRCWQYSVD DQTMVESVSP ELKEQASLLQ
GDKCAKYAKS SLDQTTRTRV AKKILAQFEE EKIYRKNGLK LQDLCVATNE SAHYISQVIN
QELGFSFFDL VNKYRIEEAQ QKLKQNRDLP ILDIALEVGF NSKPTFNKAF KLRVGQTPSE
FRAK
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