Gene Sde_3147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3147 
Symbol 
ID3965581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4022877 
End bp4023461 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content49% 
IMG OID637922244 
Productphosphoheptose isomerase 
Protein accessionYP_528616 
Protein GI90022789 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAAC GCGTTTATTC TCTTTTTCAG CAAAGTGTTG AAGCTAAAAT GCAAGTGGGC 
GAAGAGCTCG CACCACTTAT TAATCAAGCC GGCGATATAC TGGTAGAAAG CCTTATTCAC
GAAGGCAAAA TACTAATATG CGGCAACGGC GTTTCTGCAG CACTGGCACA GATTTTTAGC
TCGTCGCTTA TCGACCGCTT CGAAAAAGAA CGCCCAAGCT TGCCCGCTAT TTGGTTGGGC
AGCAATATAG CCACCTACAC CGCCATTACC GCCGACTACA ACCAAAGTGA AGTGTACGCA
AAACCCGTGC GCGCTCTGGG CCAAGAAGGC GATATTTTGG TTGTAATCAG CAGTAGTGGT
AACTCGGCCA ATTTAGTACA AGCTATTTCT GCAGCACACG ACCGCGGCAT GAATGTTATT
GCACTTACCG GCCGCGACGG CGGAGATATT TCCTCGCTGC TTGATGTCAA CGATATAGAG
CTGCGCGCCG ATTTGAATTC TCGAGGTCGT ATTCACGAAG TGCATATGCT TACAATTTTT
TGCCTGTGCG ACCTCATCGA TCACCGCCTA TTTGGACTGG AGTAA
 
Protein sequence
MPQRVYSLFQ QSVEAKMQVG EELAPLINQA GDILVESLIH EGKILICGNG VSAALAQIFS 
SSLIDRFEKE RPSLPAIWLG SNIATYTAIT ADYNQSEVYA KPVRALGQEG DILVVISSSG
NSANLVQAIS AAHDRGMNVI ALTGRDGGDI SSLLDVNDIE LRADLNSRGR IHEVHMLTIF
CLCDLIDHRL FGLE