| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3146 |
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| Symbol | |
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| ID | 3965580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 4022503 |
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| End bp | 4022859 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922243 |
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| Product | sigma-54 factor |
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| Protein accession | YP_528615 |
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| Protein GI | 90022788 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
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| TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC ACAACGAAAC CGGCACTCAG GCAGAAATAC TCGCCGAACA GCACCTCGTA
AGCCAAGGCT TAACCCCCTT GGCTCGCAAT TACCATTGCA AGGGCGGTGA GATCGACCTT
ATTATGCAAC AGCAGCGAGC GCTGGTATTT GTGGAGGTAC GCTTTCGCAA ATCGGCTGCA
TTTGGCAGCG CCGCCGCAAG CGTGACGCGA TCCAAGCAGC AAAAGATTGT TACCGCTGCA
CAACATTTTT TAATGGATAA CAGCAAGCTG GCAAACTTGC CCTGTCGATT TGATGTGGTG
GCCATTACCG CCGGTCAAAT AGAATGGATA GAAAATGCCT TTACCCTCAA TGAATAA
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| Protein sequence | MAKHNETGTQ AEILAEQHLV SQGLTPLARN YHCKGGEIDL IMQQQRALVF VEVRFRKSAA
FGSAAASVTR SKQQKIVTAA QHFLMDNSKL ANLPCRFDVV AITAGQIEWI ENAFTLNE
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