Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3143 |
Symbol | |
ID | 3965577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 4018313 |
End bp | 4019422 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637922240 |
Product | hypothetical protein |
Protein accession | YP_528612 |
Protein GI | 90022785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.387409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAC AACCGCTACG CACACTCGTT ATTTGCACCG CCGCCAGCCT AATATGCGCC TTGTTCAGCG CATGCAGTAC TCTCATCCCT CAGCAGGCAC CACTGCAAAC AGTTGCCCCC AACCACCCAA TGGTAACGGT GAGTGGGCGC ACGCAAACTA TGCTAGATGG CAGCGAGCGC TTTGGCTACC CGGGGGTGAG CTTTACAGTA AATGTAAAAG CCAAGGGCGT AATATTTAAC GCGAGTAGCA CCAGTGGTAA CAACTACCTC GATGTGTATA TCGACGGTCG ACTGCAACGC AGTATCAAAC TAGAAAAAGC CGCAACCGAC TACGTGGTGT TCAACCACAA TCGCGCCCGG CAACACCAAG TAAAAATACT TAATCGCTCG GAAAGCTGGC ACGGTTTGGC CACCCTACAC AGTATTCGCG TGCAAGACGG CAAATTTTTA GCGCCGCCCG CCAAACCGCG CACCAAACTA CTGGTAATAG GCGACTCGGT TACTTGTGGC ACTGGCGCAA ACAGAAAACA AGGCTGCGAG ATGGACCCGA GCTGGTGGGA TGCACACAAC TCGTTCGGCA TGCAGCTAGG CCGCGCGCTA AGCGCTGAAA CGCATTTAGT GTGCTACGGC GGCCGCGGTG TAATGCGCAG CTGGAACGGC GAGCCTAAAG ATATACAGGC CCCAGCCTTT TACGACTTAG CAGTGCCAGA ACCATGGGCA GATGCCCCGT GGGATAACAG CAAATTTAAA GCAGATATCA TTTTAGTATC GCTGGGCACT AACGATTTTA GTATGGGTAT TCCCGACCAG CAGGCGTTTA TAAATACCTA CGTTGCATTC GCGACTATTT TGTTACGCGA CCACCCTAAC GCCACCATCG CCATTACCGA TGGCGCCATA CTGGGCCACG ACGAACTCAA CAAAAAAGGC ACATTGCAAA ACTACTTAAA ACAGGTGCAA GCAGCCGTTG ATAGCCCACG CCTCGCGTTT ATTCCATCGA ACATATACGC CGGTGACAGC TGCGACGCCC ACCCAACCGG CGAACAACAC ACCCAAATGG CACAAGACCT ACAAGTACAA TTGGAACAAC TGCTAAATAC CAATCGCTAA
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Protein sequence | MSIQPLRTLV ICTAASLICA LFSACSTLIP QQAPLQTVAP NHPMVTVSGR TQTMLDGSER FGYPGVSFTV NVKAKGVIFN ASSTSGNNYL DVYIDGRLQR SIKLEKAATD YVVFNHNRAR QHQVKILNRS ESWHGLATLH SIRVQDGKFL APPAKPRTKL LVIGDSVTCG TGANRKQGCE MDPSWWDAHN SFGMQLGRAL SAETHLVCYG GRGVMRSWNG EPKDIQAPAF YDLAVPEPWA DAPWDNSKFK ADIILVSLGT NDFSMGIPDQ QAFINTYVAF ATILLRDHPN ATIAITDGAI LGHDELNKKG TLQNYLKQVQ AAVDSPRLAF IPSNIYAGDS CDAHPTGEQH TQMAQDLQVQ LEQLLNTNR
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