Gene Sde_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3133 
Symbol 
ID3965533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp4007257 
End bp4008159 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content55% 
IMG OID637922230 
Producthypothetical protein 
Protein accessionYP_528602 
Protein GI90022775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCA GTCACAGTCC TTTTCATAGC GCCCATGTGG CGAGCGCCAC CCCTGCTGCA 
CATCGCACAG TAGGGGAATT GGCCGCGGAT GAAAAAGGCG TGGTACTGCA AAGTCCTACT
ATTGCCGCTG TGGACGAAGC GTCTGCGCCG GTTAAAGCTG GTATCTCCTC CCAGCAAAAC
AGTTCTGTTT CCCCCACTGA TACCTCCAAT TCTCAAACTA AACCCTCTAG CGACGACGCT
CTGCAAGCCC TGCGCGAACG TGAAGCCGCG GCAAAAGCGA AGGTTGAGCA GGCTGAGTTG
GCGCAAATGC AGCGCGAAAT TGCCAGTTTG GCCGCGCGTG ATAGAGAAGT GCGGGCGCAT
GAGCAGGCCC ATATGGCGGT AGGTGGCCAG TATGCAGGTG CGGCACAATA CCAATATGAA
CGCGGGCCAG ATGGCATAAA TTACGCGGTG GCGGGTGAAG TACCTATTGA TATAGGTCGG
GCAGCCGACC CGCAAGCCAC CATTGAAAAA GCGCGCACAG TTAGGCGCGC GGCCCTGGCG
CCAGCAGATC CATCGCCACA GGATAGACGT ATCGCAGCCC AAGCTAGCAG GTTAGAGGCT
GAAGCTCTTC AAGAGTTAAA CGAACAGCGC CGCGCAGAGC AGGCAGAAGC AAGTGAAGCT
AAGCAAAGGG CACGCGAGGC CAATAGCGAC GATAAATCTA AATCAGAGCT CGGCGCTGCC
GAATCTACCG GCAACGTTAT TCAGTCAGCC AGCCCTACAG GCATTGTTAG CGAGTCCAGT
TCGAACAATA CTATTGCTAG CCCTGCGCTC AGTAATAATC AGTTAAAACA GGTGAATACA
CTCGTTGGTG TGCAGTCGCT TGCTAGTCCA CGCCCCAACA CCATTTTGGA CGACCTCGTA
TAA
 
Protein sequence
MIASHSPFHS AHVASATPAA HRTVGELAAD EKGVVLQSPT IAAVDEASAP VKAGISSQQN 
SSVSPTDTSN SQTKPSSDDA LQALREREAA AKAKVEQAEL AQMQREIASL AARDREVRAH
EQAHMAVGGQ YAGAAQYQYE RGPDGINYAV AGEVPIDIGR AADPQATIEK ARTVRRAALA
PADPSPQDRR IAAQASRLEA EALQELNEQR RAEQAEASEA KQRAREANSD DKSKSELGAA
ESTGNVIQSA SPTGIVSESS SNNTIASPAL SNNQLKQVNT LVGVQSLASP RPNTILDDLV