Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3127 |
Symbol | |
ID | 3965527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 4000789 |
End bp | 4001475 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922224 |
Product | GntR family transcriptional regulator |
Protein accession | YP_528596 |
Protein GI | 90022769 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACA CGGCTATAGA ACAAGAAACT TCACTGTCTC GCGTAGAATT GGTATACCGC AAGTTGCGAG ATAACATTAT TACCAATCAG TTCCCCCCTG GTTATCAAGC TTTAGAACCG GAGATTGCTA AACAGCTTGG TGTTAGTCGC ACACCGGTGC GCGAAGCGCT AATTCGTTTA GAAGCTGAAA ATCTTATTCA GCTGGTTCCG CGTCGCGGTA TGCGCGTTTT GCCTTTGGTG CCCGACGACA TAAAAGAAAT TAACGAAATT TTAACTGGCT TAGAAGTGAT GGCTGTAGAG CTGCTTGCTA AGCAAAAGCC TGGGCGTGAT TTGCTAGAGC CGATGGAGTC GGCATTGGAT GAGATGGATA AGTCTCTGTT AACCGGTGAT ATGGAGCTTT GGGCTGAAGC AGACGAGAAA TTTCATCGCT TTCTTTTGGC TCTGGCTGGC AACCAACGCT TGGCTTCCAT GGCCGAAAGT GTGCGAATTC AATCGCAGCG CTCTAGAAAA ATTACGCTTA AATTGCGCCC CTCTCCCGAG TCGACAAACA GCGCGTACCG CAAGTTGTTA AATGCAATTG CAGCAGGCAA CTGGCAAGAG GCGAAAGAGG TGCACTATCA ACACCGTTTG GAGGTAAGCC AAATGCTGGT AGATTTATTA GAAAAATATC AGTTGCCGCA CCTTTAG
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Protein sequence | MNDTAIEQET SLSRVELVYR KLRDNIITNQ FPPGYQALEP EIAKQLGVSR TPVREALIRL EAENLIQLVP RRGMRVLPLV PDDIKEINEI LTGLEVMAVE LLAKQKPGRD LLEPMESALD EMDKSLLTGD MELWAEADEK FHRFLLALAG NQRLASMAES VRIQSQRSRK ITLKLRPSPE STNSAYRKLL NAIAAGNWQE AKEVHYQHRL EVSQMLVDLL EKYQLPHL
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