| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3125 |
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| Symbol | |
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| ID | 3965525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3999254 |
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| End bp | 4000036 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922222 |
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| Product | endonuclease V |
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| Protein accession | YP_528594 |
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| Protein GI | 90022767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAA CTATACGTCC TACAACCCCC TCCACAACAA AACATCTTGT AGGTAACACT
GTGGCCAGCC GTTTATTTCA AACACCCCCC ATTTTATGGA AGGGCGATAT AGGCGAAGCT
AAAGCTCAGC AAGAGCTTAT GGAATCGTAT ATCAATTTAG CACCACTGAA TAAATCACTA
ACACTTATTG CAGGGGCCGA CATATCGTGT AACAAAAACA GCCCTGTTAT TTACGCAGGT
ATTGTAGTGC TTAACGCAGA AACGCTAGAA ATAATTGAAC GAGCAAGTGT AATTACCGAA
ACAGCGTTTC CATATATTCC CGGTTACCTG TCTTTTAGGG AAGTGCCCGC TTTATTGCAA
GCTTGGCAAA AACTCACCAC AAAACCCGAT GCGGTTATGC TAGATGGCCA CGGCGTTATG
CATCCACGCA AAGTTGGCGT GGCCACTCAT TTTGGTTTAG CCGCAAATGT GGCCACTTTG
GGCTGCGCCA AAAAAAGGTT AATAGGCCGC TTTGATGACC CAGCGCCAGC CCAAGACAGT
GTAACGGAGT TAACTTACCA AGGAGAGATG CGCGGCTATG TGTACCGCAG CCGCGCGGGT
ATTAAACCCA TTTTTATTTC ACCCGGCACA GGCATGAATT ACGAAGATGC TCTAAGCATT
ACTCGCCAAA CCTGCGCAGG CTATCGACTA CCTGAACCCA CACGTTTGGC ACACCAATAC
GTCAACGAAA TAAGAGTGGC ACACGGCGAG CAGCCACCCA CCAATAACAA AGGCTCTGTC
TAA
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| Protein sequence | MDTTIRPTTP STTKHLVGNT VASRLFQTPP ILWKGDIGEA KAQQELMESY INLAPLNKSL
TLIAGADISC NKNSPVIYAG IVVLNAETLE IIERASVITE TAFPYIPGYL SFREVPALLQ
AWQKLTTKPD AVMLDGHGVM HPRKVGVATH FGLAANVATL GCAKKRLIGR FDDPAPAQDS
VTELTYQGEM RGYVYRSRAG IKPIFISPGT GMNYEDALSI TRQTCAGYRL PEPTRLAHQY
VNEIRVAHGE QPPTNNKGSV
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