Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3121 |
Symbol | |
ID | 3965521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3992562 |
End bp | 3994790 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637922218 |
Product | glucan endo-1,3-beta-D-glucosidase |
Protein accession | YP_528590 |
Protein GI | 90022763 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TAAAGCTTCT AGAACTTTCG CTGGTGGTGT TGGTAGCCCT AGGGCTAGCG AGCTGCGGCG GTTCTGACGA CAAAAAAACG CCAGACCCAG TAGAAGAACC CGTGGGTGAA CCAGAATCAG AGCCTGAATC AGAGCCAGAA TCTGAACCCG AATCTGAGCC AGAACCAGAA AACGCATGGC AATTGCTGTG GGAAGATAAT TTCGACAGCG AAATAAGCGC ATCTAACTGG GGCTTCGAAG TTAACTGCAC CGGCGGGGGT AACAACGAGA AACAGTGTTA TACCGATAGA GCCGACAACG CTTATGTAGA TGAGGCAGGC ATACTGCACA TAGTTGCCAA AGAGGAAGCA TTTAGCGGAC CCGCTATTCA GGATGATGAC CCCAACTACA ACCCCGATGA CACATCGGCT GCGCGCAATT ATACCTCTGC GCGTTTGCGT ACATTAGATA AGTTTGACTT CAAATATGGT CGAGTCGAAA TTCGTGCGCA AATACCAGGT GGGCAGGGCT CATGGCCTGC ATTGTGGATG TTGCCAAGTG ACAAAGTATA TGGTGGTTGG CCAGCCAGTG GCGAAATCGA CATTATGGAA GCGGTTAATT TAGATACTGA TGCGGCCAAT GCCGTGCATG GTACTTTGCA CTACGGTTTA CAGTGGCCAC AATGGTCGAC GATAGGCGCT TCTTACGAAA CAAATGATGA TTTCACCGGT GAGTTCCACA CTTATGCCAT TGAGTGGGAA GCAGACCAAA TTCGCTGGTT TGTGGATGGC GTACACACTC AAACACAGGT GTCCGATAAC TGGTACAACT TTGTATGGGG CGGGCAAGAG TCCGGCTTTG CTGTGGCTAA CCCGCGTGCA CCTTACGATC AAGAGTTTCA TTTAATCATG AACGTCGCTA TAGGCGGCAA CTGGCCGGGT GACCCGGACA CGGGTTGGGC ATCTGATCGC GAAATGCTTG TAGATTATGT GCGTGTGTAC CAGTGTGATT CTGAAGCCGA TGATGGAACA GGCTGTGCAA ACGCAACCGA CGCCGTTGAT ATTGCTATTT CACCGACCGC AGATGTAGGT GCGCCATCAC AAGTAGAATA CGACCTATAT AGTGACGGTT TACAAACGCC TGCATTTACC AACGCCGGCG TAACTCTTGC TGCAAATGTT TGGCAAGAAA CAGAAGGCAA CGTAGTAACT ACCACTGGCA ACTTGGGCGA CGACCATGGC GATGCTTGGG AAATTACCTT TAATGGTACT GGTAATGTAT CTATTGCTAT TGCCGAGCAA GACGGCGTGG AAAGCTATGT GCGATTAAAT GGCGGAACAG CTTGGAGTAA CTACGGCGTA CTAGCGTTTG ATATGTATGT AGATAGCGTG GATGCCGAAA CTGGCTTTGT TGTTAAAATG GACAGTGTTT ACCCCAATGT AGGTGCTGTA GATATTGCTA CACCTGCCGC AGGTGAGTGG ACGCGAGTGC ACGTAAAAGT GGCTGATATT TTAGCTAACC CAATTGCAGG TGGCGGTGGC CTTAACGTTG CGCAAGCGGT TAACTTGTTT GTACTTGAGC CAACAGGTAC TAAAACAGCA CATGTATATG TAGATAATAT TTCTATTAGC TGCGCATATA ACTCTACTGC AAAATCTTGG CAGGGTGATA AAACCTGTGA TGTTGCAGCG GTGCCTACTG CCGATACCTC AGGTATAGAT TTAAGTGGTA ACGAGCTTGT GATTTTTGAT GAGCAAGAGC CGGATTTTTG GGGTTTTGGG CAGTTTTCTG CTGGTGGTGC TGAAGTAGCA ATGAGCTTCT TAGCTGACCC AGAAGATGCG AGTCACGGTA ATGTGTTGGG CTTTAGCTAC CCAGATAGCC AAAACGTTGC CTACTTACAA TCTGCTACAC CGCTTAATTT AAGCGATTGG GCTGGGGGTA CTATCCAATT CGACATGTAC GTTATTAGCG AGCCTGCTAA TGTAAATTGG ATGATGAAAG TGGATTGTGT ACACCCTTGT TCATCTGGCG ATATACCGCT CACCACCAAT ATTGATGGTG TAGTGCCTGC TGTGGGTGTA TGGCAAACCT ATCGCTTTAA CTTAGATGCA TTAGTTGCTG GCAACCCAGG GTTAGATTTG ACCAAAGTGG ATACGCCGCT AGTAATATTC CCTGCATGGG ATAACCAAAC CGGTGCTAAC TTCCGTATAG ATAACATTAA ATTTGTTCGG GCTAACTAG
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Protein sequence | MKKLKLLELS LVVLVALGLA SCGGSDDKKT PDPVEEPVGE PESEPESEPE SEPESEPEPE NAWQLLWEDN FDSEISASNW GFEVNCTGGG NNEKQCYTDR ADNAYVDEAG ILHIVAKEEA FSGPAIQDDD PNYNPDDTSA ARNYTSARLR TLDKFDFKYG RVEIRAQIPG GQGSWPALWM LPSDKVYGGW PASGEIDIME AVNLDTDAAN AVHGTLHYGL QWPQWSTIGA SYETNDDFTG EFHTYAIEWE ADQIRWFVDG VHTQTQVSDN WYNFVWGGQE SGFAVANPRA PYDQEFHLIM NVAIGGNWPG DPDTGWASDR EMLVDYVRVY QCDSEADDGT GCANATDAVD IAISPTADVG APSQVEYDLY SDGLQTPAFT NAGVTLAANV WQETEGNVVT TTGNLGDDHG DAWEITFNGT GNVSIAIAEQ DGVESYVRLN GGTAWSNYGV LAFDMYVDSV DAETGFVVKM DSVYPNVGAV DIATPAAGEW TRVHVKVADI LANPIAGGGG LNVAQAVNLF VLEPTGTKTA HVYVDNISIS CAYNSTAKSW QGDKTCDVAA VPTADTSGID LSGNELVIFD EQEPDFWGFG QFSAGGAEVA MSFLADPEDA SHGNVLGFSY PDSQNVAYLQ SATPLNLSDW AGGTIQFDMY VISEPANVNW MMKVDCVHPC SSGDIPLTTN IDGVVPAVGV WQTYRFNLDA LVAGNPGLDL TKVDTPLVIF PAWDNQTGAN FRIDNIKFVR AN
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