| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3099 |
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| Symbol | |
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| ID | 3965480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3957034 |
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| End bp | 3960384 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922196 |
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| Product | transglutaminase-like domain-containing protein |
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| Protein accession | YP_528568 |
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| Protein GI | 90022741 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases
[COG4196] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.595628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC GTGTCGCTTT ACAGCACAAC ACGTATTATA AATTCGACCG CATGGTTAAC
CTGTCGCCCC ATGTCGTGCG CTTGCGCCCC GCGCCCCATA GCCGTACGCC TATTACCAGC
TACAGCCTTA AAGTAAAACC CGAAACGCAT TTTATAAACT GGCAGCAAGA CGCCTTTGGC
AACTACCTTG CGCGGTTGGT GTTCCCCGAT AAAACCAAAG AGTTTTCGGT AGAAGTAGAA
GTTATTGCCG ATATGACGGT AATCAACCCG TTCGATTTCT TCCTAGAAGA GTATGCCGAA
AAATTTCCGT TTGAATACGA AGATCAACAA AAGAAAGAGT TGCTGCCCTA CCTAGAAGCC
AAAGATTACG GCCCCAAGTT TGCAGAGCTA GTAAAAGGTG TATCGCTTAA ATCTAGGCCC
ACCAACGACT TTTTAGTAGA GCTTAACCAA AGCATTCAAA AAATAGTGGA TTACACCATC
CGCCTAGAGC CGGGTGTGCA AACGCCAGAA GAAACCCTAG AGAAAAAGCT GGGTTCCTGT
CGCGACTCGG CGTGGTTACT GGTGCAGTTG TTCCGCCACT TGGGCGTAGC TGCGCGCTTT
GCGTCGGGTT ATTTGGTGCA GTTAAAAGCC GACGAAAAAT CATTAGATGG CCCCTCGGGC
GCAGAAGAAG ATTTCACTGA CTTACACGCG TGGTGCGAAG TATTTTTACC CGGTGCAGGC
TGGGTAGGGC TAGACCCAAC CTCGGGCTTG TTTGCCAGCG AAGGCCATAT CCCACTTGCG
TGTACGCCAG ACCCAAGTTC TGCCGCACCC ATTGCCGGCT TTACCGATAA GTGCGAAGTA
GAATTCGACT TTTTAAATAC CGTCGCGCGC ATCCACGAAG ACCCGCGCGT AACCAAACCT
TACACCGAGC AGCAGTGGCA AGAAGTACTT GCTCTAGGTA AATTTGTAGA TAGCAAATTA
GAAGCCGGTG ATGTGCGCCT TACCATGGGT GGCGAGCCAA CGTTTGTTTC TATAGACGAT
ATGGAATCGG CACAGTGGAA CACCGCCGCC CTAGGCGAAG ATAAGCTGCG CTTAGCGAAA
ACCCTACTGT TAAAACTGCG CGATCACTTT GCCCCGCACG GCTTACTGCA TTACGGTCAA
GGTAAGTGGT ACCCGGGCGA AGAAATTCCG CGCTGGGCGC TGGGTTTATT TTGGCGTAAA
GATAACGAGC CACTGTGGGC CGATCACAAA CTCCTAGCGC GAGTAGATAA AGACTACGGC
CACGGTTTAA CTACCAGCAC CAAATTTGCA CGCAAACTGG CTGCCAAACT GGGCCTGGAA
AAAGACTTTG CCCAACCCGC CTATGAAGAT GGTTTGCATT ACCTGCTAGA AGAACGCTCG
CTGCCCAACA ACATAGATAA ACTGTGCAAC TCGGTAATGC GCAACGATTT AAGCCGTAAA
CGCTTAGTGC ATTTACTTGA AAAGGGCATA GATAAACCCA CAGGTTTTGT ACTGCCCCTA
GCCAAAGACT TAGCCAACAA TTGGATAAGT AGCAAATGGC CAATGCGACG CGAGCGCATT
GTGCTTATTC CAGGTGACTC CCCCATGGGG CTGCGTTTGC CATTGGGGTC GCTACCGCTC
GAAGAAGAAA AAGAACTCGA TGTAAAACCC GATCCGTTCG AGCAACGCCA GTCGTTGGCT
CCGCACAGCG AATTGCTACA AGGCGCAGAA AAAATTCAGC CGCAAGTGGC CGAGCCGGTA
AAAGAACCAA ACGCAAAACA AACGCAAACC GTACCCGTTG TGCGCACCGC GTTATGTGTA
GAAAGCCGCA AGGGCAAACT GCATTTATTT ATTCCGCCCA TTCCGCTATT GGATGATTAT
GTAGCGCTTA TTGCGGCCAT AGAAGCCGTA GCCAAAGAAA TGGATGTGCC GGTAATTATT
GAAGGCTACG AGCCACCGCG CGATTCGCGC CTTGTTAAAT TATTGGTTAC ACCAGACCCA
GGTGTAATAG AAGTCAACAT TCACCCAGCG AACAACTGGG ATGAAATAGT CGCCACTACT
TCCGAGCTAT ATAAAGCCGC ACGCGAGTCG CGTTTAGGCA CCGAGAAGTT TATGTTAGAT
GGTCGTCACT CCGGTACCGG CGGCGGCAAC CACGTAACCC TAGGTGCGGC CACGCCCGCC
GATAGCCCAT TTTTGCGCAG GCCAGATTTA CTGCGCAGCT TTGTGACCTA TTGGCAGCAC
CACCCCAGCT TGTCGTATTT GTTCTCTGGT GGGTTTGTGG GGCCAACCAG TCAGGCGCCG
CGCGCCGACG AAGGCCGCGA CGAAATGCTT TACGAAATGG AAATAGCTTT CGAGCAAATG
CCAGATGGTT TTGTCAACGA ACCGTGGCTA GTCGATCGAC TAATGCGCAA CCTGCTAATA
GACATTACCG GCAACACGCA CCGGGCAGAA TTTTGTATAG ACAAACTCTA CTCGCCAGAT
TCACCCACAG GGCGGCTGGG CATATTGGAG TTCCGCGGTT TTGAAATGCC GCCGCACTAT
CAAATGTCGC TGGTACAAAT GTTGTTAATT CGCGCCTTAA CCGCGCGTTT TTGGCAAAAC
CCTTACAAGC AACCGCTGGT GCGCTGGGGT ACGTTGCTAC ACGATAAATT TATGTTGCCT
CACCACGTGT GGGCCGACGT AAAAGATGTG GTTAAAGACC TAAACGACCA CGGTTTTCCG
TTCCGCGAAG AGTGGTTGTT GCCGTTCCAA GAATTCCGCT TCCCCCATTA CGGTCGGGTA
GAAGTAGACG ATATCGAATT GGAGCTGTGC TGGGCCGTAG AGCCTTGGCA TGTGCTGGGC
GAAGAGATAG GCAGCTCGGG TACTGCGCGC TACGTCGACT CGTCGGTAGA GCGCTTACAG
GTAAAACTTA CAGGCTTAAC TGAGGGGCGG CATGTGGTTG CTTGTAACGG TCGCCGTGTG
CCGCTGCGCA ACACAGGTAA AAAAGGCGAG TATGTTGCTG GGGTACGCTA CCGCGCCTGG
GCACCGCCTT CGGCATTGCA CCCTACATTG GGCACGCACA CACCATTGGT GTTCGATATT
ATTGATGCAT GGAATGGCCG CGCCATTGGC GGTTGTACTT ACCATGTATC GCACCCGGGC
GGTCGCACTT ACGAAACCTT CCCTGTAAAC GCGTTCGAAG CCGAGTCGCG CAGGGTAAAT
AGGTTCGATC AAATGGGGCA CACCCCTGGG CCAATTACCC CGCGCCCAGA CCTAAACGCA
GTACGCGAGT TCTTCCCGCA CGGTAAGTTA CCTAAGCCTA TGGCGCCGCC GCCAGAAGAA
CCAGCAGGTG AATACCCATA CACCTTAGAC TTAAGACGAA AGCCTAGATA A
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| Protein sequence | MTIRVALQHN TYYKFDRMVN LSPHVVRLRP APHSRTPITS YSLKVKPETH FINWQQDAFG
NYLARLVFPD KTKEFSVEVE VIADMTVINP FDFFLEEYAE KFPFEYEDQQ KKELLPYLEA
KDYGPKFAEL VKGVSLKSRP TNDFLVELNQ SIQKIVDYTI RLEPGVQTPE ETLEKKLGSC
RDSAWLLVQL FRHLGVAARF ASGYLVQLKA DEKSLDGPSG AEEDFTDLHA WCEVFLPGAG
WVGLDPTSGL FASEGHIPLA CTPDPSSAAP IAGFTDKCEV EFDFLNTVAR IHEDPRVTKP
YTEQQWQEVL ALGKFVDSKL EAGDVRLTMG GEPTFVSIDD MESAQWNTAA LGEDKLRLAK
TLLLKLRDHF APHGLLHYGQ GKWYPGEEIP RWALGLFWRK DNEPLWADHK LLARVDKDYG
HGLTTSTKFA RKLAAKLGLE KDFAQPAYED GLHYLLEERS LPNNIDKLCN SVMRNDLSRK
RLVHLLEKGI DKPTGFVLPL AKDLANNWIS SKWPMRRERI VLIPGDSPMG LRLPLGSLPL
EEEKELDVKP DPFEQRQSLA PHSELLQGAE KIQPQVAEPV KEPNAKQTQT VPVVRTALCV
ESRKGKLHLF IPPIPLLDDY VALIAAIEAV AKEMDVPVII EGYEPPRDSR LVKLLVTPDP
GVIEVNIHPA NNWDEIVATT SELYKAARES RLGTEKFMLD GRHSGTGGGN HVTLGAATPA
DSPFLRRPDL LRSFVTYWQH HPSLSYLFSG GFVGPTSQAP RADEGRDEML YEMEIAFEQM
PDGFVNEPWL VDRLMRNLLI DITGNTHRAE FCIDKLYSPD SPTGRLGILE FRGFEMPPHY
QMSLVQMLLI RALTARFWQN PYKQPLVRWG TLLHDKFMLP HHVWADVKDV VKDLNDHGFP
FREEWLLPFQ EFRFPHYGRV EVDDIELELC WAVEPWHVLG EEIGSSGTAR YVDSSVERLQ
VKLTGLTEGR HVVACNGRRV PLRNTGKKGE YVAGVRYRAW APPSALHPTL GTHTPLVFDI
IDAWNGRAIG GCTYHVSHPG GRTYETFPVN AFEAESRRVN RFDQMGHTPG PITPRPDLNA
VREFFPHGKL PKPMAPPPEE PAGEYPYTLD LRRKPR
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