| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3098 |
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| Symbol | |
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| ID | 3965479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3954317 |
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| End bp | 3956878 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637922195 |
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| Product | hypothetical protein |
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| Protein accession | YP_528567 |
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| Protein GI | 90022740 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2307] Uncharacterized protein conserved in bacteria
[COG2308] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.915936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCAAT CTCAAAGCCA AACTTCCAAC ATTCATACAG CGCAAATCCC CCTTGCCTAC
CGCAAGGCGA AAGCGCATGT GGACGAGGTT TTTACGCCCA CCGGCGAGCA GCGGGAGCAT
TGGAACTACC TGTTAGAAAG CCTAAAAACA TTGGGGGCAG GCGGTTTAAG TGACCGTCAA
GCCAAGGCCC TGCGTATTCT GCGCGACGAT GGCGCCACCT ATAATATTTA CGGCGATAGC
GCCAGCCTAA GCCGCACCTG GGAGCTAGAC CTTGTTCCCG CACTTATTAG CAGCGGCCAA
TGGAACAAAA TAGAATCTGG CTTGCTCGAG CGCGCCGAGC TACTTAACGC CCTATTAAAA
GATATATACG GCCCGCGCGA TTTAATTCGC CACGGCATTA TTCCGCCAGA AGCGCTGTTT
AGTCACAACG GCTTTTTGCG CCCTTGCCAA GGTATTGTTA CCCCCGGCGA TCAAGAGCTT
ATATTGCACG CCGTCGATAT GGTGCGCGAT GCCGACGGTG AAATGTGCGT ACTGGCAGAT
CGCACCCAAG CCCCCAGCGG CATGGGCTAC GCCTTAGAAA ACCGCACGGT TATGTCGCGG
GTGTTGCCCA GCTTGTTCCG CGATAGCCAA GTGCACCGCT TGGCCACGTT CTTCCAGCGC
CTGCGTCAAA AGCTGGCGTC TATGAGCGAA GCGCACGACC AACCGCGCAT AGTGCTGCTT
ACCCCCGGCG CCCATAACGA AACCTATTTC GAGCACGCCT ACTTAGCTAA CTACCTTGGG
TTTCCGCTGG TACAAAGCGG CGACTTAGTG GTGCGCAACG GCTTTTTGTG GATGAAATCC
CTCGATGGCT TAAGCCGCGT AGATGTGATT TTACGGCGCG TAGACGATTG GTTTTGCGAC
CCCGTAGAGC TGCGCGGCGA TTCTCAATTG GGTGTGCCCG GCCTGCTAGA AGTGGTGCGC
GCAAACCGTG TGGTTATTGC TAACCCGCTG GGTTCCGGCG TATTAGAAAA CCCCGTATTG
CTTAAATACC TGCCGCAAAT AAGCAAAGCA TTGCTTGGCC GCGAACCGCG TATGAAATCT
ATTCCCACCT ATTGGTGTGG CGATAAAAAA GATATGGAGT ACATCACCAG CCATTTTGAT
CAGCTGGTAA TTAAGCCTAT TTCGCGCGGC GTAGGGCGCA GCAGTGTGCT TACCCATACG
CTAAGCAAAA AAGATCGCGA ACAATGGCTG CAACGCATCA AAGCACAACC GGCCAACTAT
GTGGCGCAAA CCTGCTTAAT TGCCAGCCAT CTGCCTACTT TTATTAACGG CGAACTACAG
CCAAGGCCGG CCATTGTGCG CAGCTATGCG GTGGCGTTCG AAAAATCCTA TTACTTGATG
CCCGGCGGCT TAACCCGAGT GGGTACCGAA GAGGGCGGCT TTTTAATTTC TGCCCAAGCA
GGTTCGCAAA GTAAAGATAC CTGGGTAATA GCCTCCGAAC CCGAGCGCGT AGAAAACGAC
AGTGCAGGTG GCGATACGTT AATAGTCTCG GGCGACGAAC ACCTAATGAG CCTGCCCAGC
CGCGTAGTAG AAAACCTATT TTGGATGGGC CGTTACGCCG AGCGCGCAGA AGCGTCGCTG
CGTATACTGC GCACCGTGTT TGTATTGCTT AACGGCGAAG AAATTATTTC TGAAACCAGT
CGCAAATATT TACTGCAAAC CGTATCGGCC ATTACTGCAA CCTTGCCGGG CTTTCACTCG
CCAGAATTGC AAGCCAACCC AGATAAAGAA TTACTGTCGC TAACCAAAGA CGCCAATCGC
GCTGGCAGTG TGCACTTTAA TTTAAATGCC ATGTTGCGCT GTGCCGATGA ATCTAAAGAG
CTACTCTCAT CCGATACACT GCGCGTAATA AACGATATAC GCGATGGCCT CGATGATTTA
GAGCAGTCTT TAAGCGGCGG TATGGCATCT GCCCCCGAAG AAGCGCTCGA CCCTTTTGTA
ACGGCACTTA TGGCCTTAGC TGGTTTAGCG CGCGAAAGTA TGGTGCACGG CATAGGCTGG
CAGTTTATGG AAATTGGCCG CCGCATAGAA CGCGGTGTGC AAACCATATG CATAATGGAT
CAATTACTAA CTCCCGTGCT TAGCGAAAAC GATCAAAAAA CCTTAATGCA AGCGCTGCTT
ACTTCGGTAG AAGGTTTAAT AAGCTATCGC CGCCGCTACC GCGCGCGCAT GGGGGTGAAG
CAAGTACTCG AGCTGGTAAT GATGGATACC GCCAACCCGC GCTCGCTGTT GTTTCAATTT
AGCGAATTAA AAAGCCAGTT GGCAACCCTG CCCAAGGCCA AAGCAAAAGC CTATGAATTA
AGCCCAGACG AGCGCGTAAT TCTCGAAGGT GAAACCGCCA TACGTTTAGC GTCGTTAGAT
GTAATGTGCG AAGAGCACAA AGAAGGACGC ACCCAATTGT CTGCTCACCT TAAACAGTTT
AATAACTTAT TAGGCGACCT AAGTATTGTG ATTAGCGAGA AACATTTCGA GCACCGCATT
GGGCCGCAGC AGTTAGTTAG CCGGTTGTCG GAGGAATTGT GA
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| Protein sequence | MSQSQSQTSN IHTAQIPLAY RKAKAHVDEV FTPTGEQREH WNYLLESLKT LGAGGLSDRQ
AKALRILRDD GATYNIYGDS ASLSRTWELD LVPALISSGQ WNKIESGLLE RAELLNALLK
DIYGPRDLIR HGIIPPEALF SHNGFLRPCQ GIVTPGDQEL ILHAVDMVRD ADGEMCVLAD
RTQAPSGMGY ALENRTVMSR VLPSLFRDSQ VHRLATFFQR LRQKLASMSE AHDQPRIVLL
TPGAHNETYF EHAYLANYLG FPLVQSGDLV VRNGFLWMKS LDGLSRVDVI LRRVDDWFCD
PVELRGDSQL GVPGLLEVVR ANRVVIANPL GSGVLENPVL LKYLPQISKA LLGREPRMKS
IPTYWCGDKK DMEYITSHFD QLVIKPISRG VGRSSVLTHT LSKKDREQWL QRIKAQPANY
VAQTCLIASH LPTFINGELQ PRPAIVRSYA VAFEKSYYLM PGGLTRVGTE EGGFLISAQA
GSQSKDTWVI ASEPERVEND SAGGDTLIVS GDEHLMSLPS RVVENLFWMG RYAERAEASL
RILRTVFVLL NGEEIISETS RKYLLQTVSA ITATLPGFHS PELQANPDKE LLSLTKDANR
AGSVHFNLNA MLRCADESKE LLSSDTLRVI NDIRDGLDDL EQSLSGGMAS APEEALDPFV
TALMALAGLA RESMVHGIGW QFMEIGRRIE RGVQTICIMD QLLTPVLSEN DQKTLMQALL
TSVEGLISYR RRYRARMGVK QVLELVMMDT ANPRSLLFQF SELKSQLATL PKAKAKAYEL
SPDERVILEG ETAIRLASLD VMCEEHKEGR TQLSAHLKQF NNLLGDLSIV ISEKHFEHRI
GPQQLVSRLS EEL
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