Gene Sde_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3070 
Symbol 
ID3965413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3922332 
End bp3922703 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content42% 
IMG OID637922167 
Producthypothetical protein 
Protein accessionYP_528539 
Protein GI90022712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0228589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG GTTGTTTTTC TGTAAGCCTA ACCGTAAAAG ACCTAAATAA ATCGAAAGAG 
TTTTACCAAA AGCTAGGTTT CGAGGTTTTT GCCGGTGAGG AATCGCATGG TTTTTTAATT
ATGAAAAATG GCGATACTAA TATTGGTTTG TTTCAGGGTA TGTTTGATAA GAACATTTTA
ACGTTTAACC CAGGCTGGAA TCAGAGTGCG GAAAACGTCG ACGGGTTTAC CGATGTGCGA
GACTTGTGTG CAGAGCTTAA AGCAAAGGGG ATAGAGGTTG TGGAAAACTC TGTAGCTGGC
GATGCTGGCC CTGGCAGTTT CTCGGTTATC GACCCCGATG GTAACCCCAT CCTTTTTGAT
CAGCATGTAT AA
 
Protein sequence
MKLGCFSVSL TVKDLNKSKE FYQKLGFEVF AGEESHGFLI MKNGDTNIGL FQGMFDKNIL 
TFNPGWNQSA ENVDGFTDVR DLCAELKAKG IEVVENSVAG DAGPGSFSVI DPDGNPILFD
QHV