Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_3065 |
Symbol | |
ID | 3965408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3919239 |
End bp | 3919784 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637922162 |
Product | hypothetical protein |
Protein accession | YP_528534 |
Protein GI | 90022707 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00194764 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAATGC GAGAAATAAC CAAACTAGAA AGTCGCGTAG TGTATGCCAA TAAATGGATG AGCGTACGCG AAGACAAAGT TTTAAGGCCG AGTGGTGCCG AAGGTATTTT TGGTGTGGTA GATAAACCCG ACTTTGCGGT AATTTTACCA GTCGAGCAGG GGCATATTCA CTTGGTGCAA CAATATCGTT ACGCCGTAGA AGCGCGCTAT TGGGAATTGC CTCAGGGGTC TTGGGAGGAA AGCCCAATCG CGGATCACCT AGCTTTAGCT GCAGGGGAAC TAAAAGAAGA GACGGGGTTG GTGGCTGCTA GCATGGTGTA TGTGGGGCAC CAGTATTTGG CATATGGGTA TTCTAGTCAG GGCTATCACA TTTACCTTGC CACGCAATTA ACTCAAGGGC AAACAGATCT CGACACGGAA GAAGAGGGGC TTATCTCTCG CCGTTTTAGT TTGCAAGAGT TTGAAGCTAT GATTATTGCT GGCGACATTA AAGATGCAAC TACGGTAAAC GCCTACGGGC TAGCAAAAAT TAAAGGTATG CTTTAG
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Protein sequence | MVMREITKLE SRVVYANKWM SVREDKVLRP SGAEGIFGVV DKPDFAVILP VEQGHIHLVQ QYRYAVEARY WELPQGSWEE SPIADHLALA AGELKEETGL VAASMVYVGH QYLAYGYSSQ GYHIYLATQL TQGQTDLDTE EEGLISRRFS LQEFEAMIIA GDIKDATTVN AYGLAKIKGM L
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