Gene Sde_3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3065 
Symbol 
ID3965408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3919239 
End bp3919784 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID637922162 
Producthypothetical protein 
Protein accessionYP_528534 
Protein GI90022707 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00194764 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAATGC GAGAAATAAC CAAACTAGAA AGTCGCGTAG TGTATGCCAA TAAATGGATG 
AGCGTACGCG AAGACAAAGT TTTAAGGCCG AGTGGTGCCG AAGGTATTTT TGGTGTGGTA
GATAAACCCG ACTTTGCGGT AATTTTACCA GTCGAGCAGG GGCATATTCA CTTGGTGCAA
CAATATCGTT ACGCCGTAGA AGCGCGCTAT TGGGAATTGC CTCAGGGGTC TTGGGAGGAA
AGCCCAATCG CGGATCACCT AGCTTTAGCT GCAGGGGAAC TAAAAGAAGA GACGGGGTTG
GTGGCTGCTA GCATGGTGTA TGTGGGGCAC CAGTATTTGG CATATGGGTA TTCTAGTCAG
GGCTATCACA TTTACCTTGC CACGCAATTA ACTCAAGGGC AAACAGATCT CGACACGGAA
GAAGAGGGGC TTATCTCTCG CCGTTTTAGT TTGCAAGAGT TTGAAGCTAT GATTATTGCT
GGCGACATTA AAGATGCAAC TACGGTAAAC GCCTACGGGC TAGCAAAAAT TAAAGGTATG
CTTTAG
 
Protein sequence
MVMREITKLE SRVVYANKWM SVREDKVLRP SGAEGIFGVV DKPDFAVILP VEQGHIHLVQ 
QYRYAVEARY WELPQGSWEE SPIADHLALA AGELKEETGL VAASMVYVGH QYLAYGYSSQ
GYHIYLATQL TQGQTDLDTE EEGLISRRFS LQEFEAMIIA GDIKDATTVN AYGLAKIKGM
L