| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3063 |
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| Symbol | |
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| ID | 3965406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3917093 |
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| End bp | 3918067 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922160 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_528532 |
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| Protein GI | 90022705 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0569079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000550931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCCA TTTTATGTAA GCAATATGGT GCACCCAGTG TATTACATGT GGGGGAAGTG
CCAAAACCTG CCCCCAAACC TAATGAAATA CTTATTCGGG TGCGCGCCGC CGAAGCCACC
AAGGCCGACT GCGAAATGCG TGCATTTAAG TTTGCGGTTA AATGGTTTTG GTTGCCATTA
CGCTTAGCCA TGGGTATTAC TAAACCTCGC AACCCTGTGC TGGGTGGTTA TTTTGCGGGT
GAGGTTGAAG CGCTAGGCGA ACAAGTTACA AACTTTAGTG TAGGCGACCA AATATTTGGC
AGTACCCAAA TGCGTTTTGG TGCCTATGGT CAGTATGTGT GTTTGCCTGC AAGTTATACC
CTTGTTAAAA AGCCTAACAA TATTTCTTTC GAGCAAGCCG CTGCTGTGCC TTTAGGTGGG
TTAAATGCAT TACACTTTTT AAGTAAGGCA AATATTAAAC CGGGCGATAA AGTACTAATA
AATGGCTCTG GTGGCAGTAT AGGCAGCTTT GCATTGCAAA TTGCTAAGCA TTGGGGTGCG
CACGTTACCG CTGTAGATAT TGGGTTTAAA GAGAACTTTA TACGCTCGTT AGGTGCCGAT
GAGTTTATTG ATTACACCAG AACAGATTTT ACCCGCAATG CTATAAGCTA CGATGTGATT
TTTGATATGG TGCCCAATAG CTCTTTTGAA GGGTGTATAG CGTCGTTGGT ACCTAACGGC
GTTTATTTAA TTGGCAACCC GCGTTTAACC GATTTGTTAA AAGCGAATAT TAAACGCTAC
GGTAAGGGCA GAGCCGTACA CGTTGCATTT GCCCGCGAAA CACTCGAAGA GCTAACTACG
CTTAAAAATA TGATAGAAGC CGAAGCGATT ATGCCGGCGG TAGATAAGGT GTATCGCATG
GGGCAAGCGG CCGAGGCGCA TATGCGGGTA GAAACGGAAC GGCGACTAGG GAGTGTTGTG
ATAGTTATTA GTTAG
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| Protein sequence | MKAILCKQYG APSVLHVGEV PKPAPKPNEI LIRVRAAEAT KADCEMRAFK FAVKWFWLPL
RLAMGITKPR NPVLGGYFAG EVEALGEQVT NFSVGDQIFG STQMRFGAYG QYVCLPASYT
LVKKPNNISF EQAAAVPLGG LNALHFLSKA NIKPGDKVLI NGSGGSIGSF ALQIAKHWGA
HVTAVDIGFK ENFIRSLGAD EFIDYTRTDF TRNAISYDVI FDMVPNSSFE GCIASLVPNG
VYLIGNPRLT DLLKANIKRY GKGRAVHVAF ARETLEELTT LKNMIEAEAI MPAVDKVYRM
GQAAEAHMRV ETERRLGSVV IVIS
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