| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3041 |
|---|
| Symbol | |
|---|
| ID | 3967705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3888106 |
|---|
| End bp | 3889158 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637922138 |
|---|
| Product | glutamine-fructose-6-phosphate transaminase (isomerizing) |
|---|
| Protein accession | YP_528510 |
|---|
| Protein GI | 90022683 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2222] Predicted phosphosugar isomerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0238474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000203733 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG TTGTACCCGC CACTGTCGCA CAAACACTTA TGTACCGCGA AGCCGAGCAG
GCTTCTAGTG TGGTAGCAAA TCAAATACAG AATAACGCGG CGTTGGTTGC CGAAGCGGCA
AAGAAAATAT TAGCTTTCGC CCCGCGCGCG GTGGCGACAA TGGCTCGTGG TAGCTCTGAC
CATGCAGCCA CCTATGCGAA ATATTTAATA GAAACTCGCT TGGGCCTGCT AACCACCTCG
GCAGCACCTT CGATTGCATC GGTATACCAA ACGCGCCCTA AACTAGACGG TGTTTTGTAT
ATTGCGTTTT CTCAATCAGG CAAAAGCCCA GATTTACTCG CCAACGTCGA GCAGGCTAAG
ACATCTGGCG CGCTTACATT GGCCATGGTG AACGTAGAAG ACTCCCCACT AGCCCAAATG
GCCGATATAG TACTGCCTTT AGGCGCAGGC CTAGAAAAAA GCGTTGCGGC TACAAAGTCG
TATATTGCAA CCTTGGCTTC TATTTTACAT TTAGTAACCG AGTTAAGTGG CGACCAAAAA
TTACAGCAGG GTTTAGGGGT ATTGCCCCAA AGCCTAGCAC AAGCATGGGA TTTAGACTGG
AGCGCAAAAG GCGTAGAAAC CTTGCAGCAT GCCAATAATA TGTTTGTTAT TGGACGTGGC
CTTGGCTTTG GTGTTGCGCA AGAAGCGGCA CTTAAATTTA AAGAAACCTG CGGTTTACAT
GCCGAAGGGT ATAGTGCTGC AGAGGTGAAG CATGGCCCTA TGGCGATTGT GAATAAAGAC
TTCCCTGTAT TGGTGTTTGG CCAAAGGGAC GAAACCCGTT TAGGTACAGA TGCACTTGTT
AGCGATTTTC GCGCGCGCGG TGCCAAAGTG CTTTACGCCG CAGAGGGCGA ACAGGGCGAC
TATATTTTGC CAGTAGTGCA AAATGCCAAC CCTGCCATAG CCCCTATATT GGGTGTGCAA
AGTTTTTATC GCATGGCGAA TGCGGTGTCA CTTGCTCGCG GCTACAACCC AGATGAACCC
CCACACCTAA ACAAGGTTAC GGAGACTTTA TAA
|
|---|
| Protein sequence | MAIVVPATVA QTLMYREAEQ ASSVVANQIQ NNAALVAEAA KKILAFAPRA VATMARGSSD
HAATYAKYLI ETRLGLLTTS AAPSIASVYQ TRPKLDGVLY IAFSQSGKSP DLLANVEQAK
TSGALTLAMV NVEDSPLAQM ADIVLPLGAG LEKSVAATKS YIATLASILH LVTELSGDQK
LQQGLGVLPQ SLAQAWDLDW SAKGVETLQH ANNMFVIGRG LGFGVAQEAA LKFKETCGLH
AEGYSAAEVK HGPMAIVNKD FPVLVFGQRD ETRLGTDALV SDFRARGAKV LYAAEGEQGD
YILPVVQNAN PAIAPILGVQ SFYRMANAVS LARGYNPDEP PHLNKVTETL
|
|---|
| |