| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3040 |
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| Symbol | |
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| ID | 3967704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3886922 |
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| End bp | 3888106 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637922137 |
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| Product | N-acetylglucosamine 6-phosphate deacetylase |
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| Protein accession | YP_528509 |
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| Protein GI | 90022682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1820] N-acetylglucosamine-6-phosphate deacetylase |
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| TIGRFAM ID | [TIGR00221] N-acetylglucosamine-6-phosphate deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.397729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000206863 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCACCG CGCTTATCAA TGCAAATTTA CTGCACGCCT ACAGAGATAG CGGCACCTAT
GCGGGCGCCG ATGTTGACGG CCAAGTTTGT GCCGATGAAG CGTACGCAGT AATTGTTGCC
GGTGATTATA TTCGCGAATT GGTACCTGTA AACCAGCTGC CCAACGATGT TGACCGCACC
ATAGATTTGG GGGGCAATTA CCTTGCCCCC GGTTTTTTTG ATACCCAAGT CAATGGTGGT
GGCGGTGTGT TATTTAATGA TGCCCCCACA GTAGAAACTT TAATTGCTAT GAGCGAAGCG
CATAAACAAT TTGGCACCAG TGCAATGCTG CCAACCCTTA TTAGCGACGA TTTAGATGTA
ATGCGCGCCG CTATTGCCGC AGTTAACGAC GCCATAGAGC AAGGCGTGCC AGGTATTGTA
GGTATCCACC TAGAAGGGCC TTTTTTAAAC CCTGCTCGCA AAGGGGTACA CAATGCCAAT
AAATTTAAAG TGATTGATGA CGAAGCATTC GATATTTTAA CGTCGCTTAA AAAAGGTAAA
ACCCTCGTAA CTCTCGCGCC AGAGCAAACC GATACACCAA CGATAAAACG TTTGGTAGAT
GCTGGTGTAG TGGTTGCGGC TGGTCACACT GCGGCGACTT ACGAGCAAAC TTGCCAAGCG
TTAGACGCAG GGCTAACAAG CTTTACCCAT TTATTTAATG CCATGACGCC AATGTCGAGC
CGAGAGCCGG GGGTTGTGGG TGCCGCGTTA CAAAGCGCAA TAAGTTGGTG TGGCATTATT
GTCGATGGCT TTCATGTGCA CCCTGCAACC TTGGGTGTAG CCATTGCTGC TAAGCCAAAG
GGAAAAGTTA TTTTGGTAAC TGATGCTATG CCTACGGTTG GCGCCGCAGA AAAAGTATTT
ACTTTAAACG GCGAAGTTAT TCGCGCAGAA AATGGCCGCT GCGCCACCGC CGACGATACA
TTGGCAGGCT CAGATTTAGA TATGTTGGCC GCGGTTAAAA ATACCGTGCA TATGATAGGT
ATTCCTTTAG AAGAAGCCGT GAAAATGGCA AGCCAATACC CCGCCGATAT GATGGGGTTA
GGCGAATGCA TGGGCCGAAT AGCCCCAGGC TACCGCGCTG AATTTACAGC TTTTGATGAA
GATTTTAATT TGGTCTCAAT CGATTCTTTA GTTACTAGAA ATTAG
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| Protein sequence | MITALINANL LHAYRDSGTY AGADVDGQVC ADEAYAVIVA GDYIRELVPV NQLPNDVDRT
IDLGGNYLAP GFFDTQVNGG GGVLFNDAPT VETLIAMSEA HKQFGTSAML PTLISDDLDV
MRAAIAAVND AIEQGVPGIV GIHLEGPFLN PARKGVHNAN KFKVIDDEAF DILTSLKKGK
TLVTLAPEQT DTPTIKRLVD AGVVVAAGHT AATYEQTCQA LDAGLTSFTH LFNAMTPMSS
REPGVVGAAL QSAISWCGII VDGFHVHPAT LGVAIAAKPK GKVILVTDAM PTVGAAEKVF
TLNGEVIRAE NGRCATADDT LAGSDLDMLA AVKNTVHMIG IPLEEAVKMA SQYPADMMGL
GECMGRIAPG YRAEFTAFDE DFNLVSIDSL VTRN
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