| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3037 |
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| Symbol | |
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| ID | 3967701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3881762 |
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| End bp | 3884149 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637922134 |
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| Product | glycosyl hydrolase |
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| Protein accession | YP_528506 |
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| Protein GI | 90022679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.542043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000668214 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTAA GATTATTACC ACATAGTATA AGTTTAGCAT CGCTATTACT GCTAAGTGCT
TGCCAGCAAG AGCACGCAAC CAGTACAAAC GCGCAACTCT CCCCTATTGC ACCGCCTGCT
ATCTCTATTG TTCCCGCACC GGTTTCGGCA GAAATAAAAA CAGGGCAGTT TGTTTTTGGT
AATAGCACAC AGCTTACAGT TAACAGCGAA AAGCTAAGAG ATGTTGCGCA GCTTTGGGCG
GATTTTTTTA ATGTTGCTAG TGGTATTAAT TTACAGGTTC AAAGCGCTAC AGGTAATAGC
GATGAAGCAA ATAGCGTAAG TCTTGAGTTG GTGCCGGCTT CAGAATTCTC ATCAAGCAAT
GCAGAAGCCT ATGAATTAAC GGTTACAGAT AATGCAATAA CAGTACGCGC TAGCACTCGC
GCGGGTATTT TTTACGGCTT AACCAGTTTG CGCCAGTTAT TGCCGCCGCA AATAGAATCA
CCCTCCCCTA TTAATTCTGT AAATTGGGTT GTACCTGCGG TTGCTATTGT CGACGAGCCC
TTATACCCCT ATCGCGGTAT GCACTTAGAT GTAAGCCGCC ACTTTTTCGA TGTGAATTTT
ATTAAACGCT ATATAGATAT ATTAGCGTTC CACAAAATGA ATCGTTTCCA TTGGCATTTA
ACCGATGACC AAGGCTGGCG TATTCCGATC GACGCCTACC CCCTACTCAC AGAAAAATCG
GCTTGGCGAG ACAAAACGGT TATAGGCCAT ACCTACGACC GCGACGTAGC TTACAACACT
AATAGAATAG GCGGTTTTTA TAGCAAAGAA CAAATACGAG ACATAGTTGC TTACGCTGCA
GAACGCCAAA TTATGGTAAT TCCAGAAATA GATGTCCCCG GCCACGCAGC AGCTATTTTA
CACGCTTACC CAGAGTTTGG TTGTATCGAG CAAGTTTCAC AGGTGCAAAG CAACTTTGGC
ATTTTCGAGC AAGTGCTTTG CCCAACCGAG CCAACCTTTG AATTTTTGCG CGCAGTGTTT
ACCGAAGTTG CCGAGTTATT CCCTGGCGAA TACCTACATG TAGGTGGCGA CGAAGTAAAA
AAAGTTCAGT GGCAACAGTC ACCCTTTGTT ACCGAATTAA TGCAGCGTGA AGGTTTAAAA
GACTACCACG AAGTACAGAG CTACTTTATT TGCCGCGTAG GCGAGATAGT AAGTAGCTTA
GATAAAAAAA TGTTGGGCTG GAACGAAATA CTCGACGGGG GTATTGCTCC CAATGCGACT
ATTATGTCTT GGCAAGGTGT TGAAGGTGGT ATTGCTGCCG CCGAGCTGGG CCACGATGCG
ATTATGTCGC CGGGAAACTA TGTGTACTTC GATCACTTTC AGTCTCGCTC GGTGGATGAA
CCACTTGCCA TTCACGGTAT TACACCGTTA TCAGAAACAT ACTCTTACAA CCCCATGCCC
GAACAATTTG CTGGCACAGA AAAAGCCAAG CACATACTCG GCGCCCAAGG GCAACTGTGG
ACAGAGTACG TGCCTACCAC AGCAAAAGCG GAGTATATGA TACTGCCAAG ATTAAGTGCG
GTAGCAGAAA TAACCTGGAC ACCAGTCAAC AAGCAATCGT GGCAAAGCTT TAGCGAAAGG
CTACCCAGCC TATTTGCCCG CTTTGACGAA ATGGGCTTAA ACGCAGCGCG ATCTGTTTAT
GCAATTACCG CTACCGCAAA AACGGAAGGC AGCGGTGAAG ATGCCAAATA CCGCGTAAAC
CTTGCCTCCG ATACGGCTCA TGTAATTATT CGCTACACAA CCGACGGCAC CTTGCCGAAT
GCGCAATCGC CTATTTATAG CGAACCATTT TTAGTAGAAG GCGATACGTT TGTGAGGGCG
CGTAGCCAAG ATAAAATAAG TGGTAACTTC TACCTGGAAT CGCAACTGCG CACCGTAAAA
CACAAAGCCG TTGGCGCCAA GCTAACACTG TTAAGCGAAG CGAATACAGA GTGGAATAAA
GACCCAGTAA AAACCTTAAG TGATGGCATT ACTTCGATAG ACCAAATATT TCAACTCGAC
GACTGGGCCA CATTTTTTGG CGACGAGGTT GTTGCACATA TAACCTTCGC TAAGGCACAA
ACCGTTAGCG AAGTAAGCAT TGGCTTTAAC CCTGGCAAGC ATCGCCAAAT GTACCCACCC
ACTCGTTTGC ATATTTTAAG CTCAAGCGAT GGCGAAACAT GGCAAAGCTT GGGTGAAGCC
GACCCACAAC ACCTTGCCAC CGCAAAAAAT CGCGTAAGTT ACACCTTTGC ACCAACAACC
ACTCGCCACC TACGGATAGA GGCGGAAAAT AAAACCCGCG TACTAAGTAC CGAAAGCGGT
AAGCTAAAAA GCGTTCCCCT ATACTTAGAT GAAATAATCG TTAAATAA
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| Protein sequence | MKLRLLPHSI SLASLLLLSA CQQEHATSTN AQLSPIAPPA ISIVPAPVSA EIKTGQFVFG
NSTQLTVNSE KLRDVAQLWA DFFNVASGIN LQVQSATGNS DEANSVSLEL VPASEFSSSN
AEAYELTVTD NAITVRASTR AGIFYGLTSL RQLLPPQIES PSPINSVNWV VPAVAIVDEP
LYPYRGMHLD VSRHFFDVNF IKRYIDILAF HKMNRFHWHL TDDQGWRIPI DAYPLLTEKS
AWRDKTVIGH TYDRDVAYNT NRIGGFYSKE QIRDIVAYAA ERQIMVIPEI DVPGHAAAIL
HAYPEFGCIE QVSQVQSNFG IFEQVLCPTE PTFEFLRAVF TEVAELFPGE YLHVGGDEVK
KVQWQQSPFV TELMQREGLK DYHEVQSYFI CRVGEIVSSL DKKMLGWNEI LDGGIAPNAT
IMSWQGVEGG IAAAELGHDA IMSPGNYVYF DHFQSRSVDE PLAIHGITPL SETYSYNPMP
EQFAGTEKAK HILGAQGQLW TEYVPTTAKA EYMILPRLSA VAEITWTPVN KQSWQSFSER
LPSLFARFDE MGLNAARSVY AITATAKTEG SGEDAKYRVN LASDTAHVII RYTTDGTLPN
AQSPIYSEPF LVEGDTFVRA RSQDKISGNF YLESQLRTVK HKAVGAKLTL LSEANTEWNK
DPVKTLSDGI TSIDQIFQLD DWATFFGDEV VAHITFAKAQ TVSEVSIGFN PGKHRQMYPP
TRLHILSSSD GETWQSLGEA DPQHLATAKN RVSYTFAPTT TRHLRIEAEN KTRVLSTESG
KLKSVPLYLD EIIVK
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