| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3030 |
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| Symbol | |
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| ID | 3967694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3869272 |
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| End bp | 3871353 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637922127 |
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| Product | putaive Fe-regulated protein B precursor |
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| Protein accession | YP_528499 |
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| Protein GI | 90022672 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000310305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000241006 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATTT CAAAACCAGC GGGTAAGCAT TTGTTTCTAC CCAGTGCGCT TGCGCTAGCC
GTTTCTGTAC AGGTTCAAGC AGAAAACGAT CTAATTGAAG AAATAAACGT TTGGGGCACA
CAGGTTATCG CTTCATCGGT AAAAATGGAT GTGGAATCCA TCGAGCTAAA GCAGGCGGAT
CATATTAGTG ACCTGCTGCG CGGCATTCCT GGCGTGGATG TGGGCGGTGC TCACTCATTA
AACCAGCGTA TATCCATCCG CAGTATGGAT GACAAAGACT TGCGTATCAC CATCGACGGC
GCAAACCAAA ATACATACAT GTATCACCAC ATGGGCAACT TACAAATTCA CGCCGACATT
TTACAGTCGG TGGATATTAA AGTTGGTAAC AACTCGGTGG TAGATGGCGG CTTAGGCGGT
ACAGTGCGCT TTAAAACAAA AGACGCCAAA GACCTGCTCG CAGCAGGGCA AGATTTTGGT
GGCCGCGTGC AGGCAAGCTA TGCCAATAAT GCCTCTATGG GTGCGGCGGT AACAGGCTAT
GGCCAGCTTA GCGAGAGTGT TGATGCATTG GTGTATTACA ACACAATTAA CCGCGACAAC
TACACCGTAG GTGGTGGCAA AATTTTAGAT GCCGATGGTG TAGAAGTGGG CAATACCGAT
GGTGAAGTAC GCGGCTTAGA GGGCACGCTT ACAGATTTAT TGGTTAAGTT CGGTTGGGAT
CTTTCTGAAA ACCAACGTTT TAAAATTGGT TACGAAGCCT ATAAAGATAA AGGCGATTAC
AGCTACCGCC CCGATATGGG CCTTGCAACC GATTGGGCAA TTAGTGAGAG CCTTGGCTTG
CCGCTAACCT TCGATACCGA GTTTACCCGC GATACCATTA CCCTTAACTA CGACGTAACA
CTGGGCGATA GCGAAGTGAG CGTGGCGGCG TTTACCAACG AAAGTAAGTT GTGGCGCGAT
GAAAGTGCCA ATCAGGCAAT CTGGCCAGAA GACCCTGCAT TAGTAGAAGG TGAAGCAACC
AACACAGGCT TTAATATTTT GGCTGTTTCG CCGGTAGGCA GTGCTCAAAC CCTTACCTAC
GGCGTAGACA TAATCAATTA CGATACGGCT TACCGTACCG ATGGCAGCCT GCAAAGTGAA
GAAAGCGCTC AAAACCTAGC GCTATTCATA GAAGACAGAA TTGAGTTGGG CGACTTCAGT
ATTATTCCTG GTGTGCGTTA CAACAGCTTC GATATTGACT CTACTGTAGT AGACGATAGC
TTCTCTAAAG TTACCGCAGC GCTTGCATTG GAATACCAAG TTTCAAATAG CCTTGTAACC
AGCTTAAGCA CAACACAACT GTTTAAAGGC CCAGAAATAG GCGAAGTGTT TATTGGTGCT
GGCCTGTATG AAACTGCAAA CCCAGGTATT GAAGCCGAAG GTGGCTTAAA TACCGAGCTT
GCTATTTCGT TTGAAGATGA AGTGCTAGGT GCTGATGCGT TCTCTACAGG TATTACCTTC
TTTAATACGC GTATTACCAA CTACATTTAC GATTACGCAA CACCGCCAGC CGAAGTGGGC
GGCCGCTCGT GGAAAGATAA CGTAGGCACC ATGAACTTAA AAGGTTTCGA AGCCTATGTT
GGTTACGATG TAGGTAACTT AACAACATTG CTTGTATTCT CTAAAGCGCA AAGTGACTTA
GATGCAAACG AGCAATACGC AAGTTTAGAT GGCGCCCGTC AAGATCGTCA GCGCGGCAAC
CCAATTAGCT TAAGCATTGA TTACGACTTA CCTTCTATTA ACGCGCTATT ACATTGGGAC
GTTCAACACC TTGGTGCTGT TGATGGCGAT TTAGCGTTAG ATTCTGCAAC ACTAAACAAC
GATAAAGACG GCTACACAGT GCACAATATG TCTGCGCGCT GGCAGCCCGA AACCGTTGAT
GGCTTAACCG TAACGTTTGG TATAGATAAC GTGTTTGACG AGTTCTACGC ATCGCAATCT
TCGCGTACAG GCACCAGTAA CCATCCGCGC TTCGGGCAGC TTTACCTCTT GGATTACGAG
CCAGGTCGTA ACGTTAAATT AACTGTTGGT TATCAGTTTT AA
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| Protein sequence | MTISKPAGKH LFLPSALALA VSVQVQAEND LIEEINVWGT QVIASSVKMD VESIELKQAD
HISDLLRGIP GVDVGGAHSL NQRISIRSMD DKDLRITIDG ANQNTYMYHH MGNLQIHADI
LQSVDIKVGN NSVVDGGLGG TVRFKTKDAK DLLAAGQDFG GRVQASYANN ASMGAAVTGY
GQLSESVDAL VYYNTINRDN YTVGGGKILD ADGVEVGNTD GEVRGLEGTL TDLLVKFGWD
LSENQRFKIG YEAYKDKGDY SYRPDMGLAT DWAISESLGL PLTFDTEFTR DTITLNYDVT
LGDSEVSVAA FTNESKLWRD ESANQAIWPE DPALVEGEAT NTGFNILAVS PVGSAQTLTY
GVDIINYDTA YRTDGSLQSE ESAQNLALFI EDRIELGDFS IIPGVRYNSF DIDSTVVDDS
FSKVTAALAL EYQVSNSLVT SLSTTQLFKG PEIGEVFIGA GLYETANPGI EAEGGLNTEL
AISFEDEVLG ADAFSTGITF FNTRITNYIY DYATPPAEVG GRSWKDNVGT MNLKGFEAYV
GYDVGNLTTL LVFSKAQSDL DANEQYASLD GARQDRQRGN PISLSIDYDL PSINALLHWD
VQHLGAVDGD LALDSATLNN DKDGYTVHNM SARWQPETVD GLTVTFGIDN VFDEFYASQS
SRTGTSNHPR FGQLYLLDYE PGRNVKLTVG YQF
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