| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_3022 |
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| Symbol | |
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| ID | 3967744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3858012 |
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| End bp | 3859946 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922119 |
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| Product | hypothetical protein |
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| Protein accession | YP_528491 |
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| Protein GI | 90022664 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000919721 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAAAA TAAACAGTAA TCAGTCTTTT CTAGTTTCTA TGCTCGCACC AGTAGTGCTT
GCATTTAGCG CAATAACATA TGCAGCAGAG CCCGCCTCAG ACCGTATTTA TATGGGAGCT
TTTACAGACC GCAATTGGTC TGAATCCAAT CCGTGTGGAG ATAAACAAAC CGAGCACTGG
GAGTGGAATC AAAATTCTCA ATGGTTTGGC AACACCAATG CTTACTTTGG GAAAATATTT
CCCGAATGGT TTTTACCTGA TGGAGCGCCC AATATCTATC AAAACTGGAA GGTAGAGGTA
GAAAGAATTA AGGCACAAGG TCGTATCCCT TACATAAACT GGGAGGCCCA TGGCCAAACG
CAAGATGGTG AATGCTGGCA CGGTGGCAAT GGGCAGAATG CCCGAGCGGA TAGAGATGTA
ATATCTGAAA TTAATGCCGG TCAGCACGAC GACTTAATAG AAAATTTAGC CATAGGTTTA
CGGGAAGAAA AAACAAAAAT AGTTATCGAT TTATTTCACG AAATGAACGG CGCATGGTAC
GACTGGTCGC CTTCCTGTAA GCATTCTGCG GGTTGGCCGG CTTGGCGCCA AGCGTTTAAG
CATGTGGTTG ATATATTTAG AGCAAACAAT GCCTACAATG TTGAATTTGG TACATCTGTT
TGGTTTGGCG CAGATATTTG TGGCAACGGC ATACAAGACA CAGTCGATAA CATTAATATA
CCGGGCTACT TAGATTGGAT AGGCATTGAT ATTTATGGCG ACGTCTACGG CAACAGCTTT
TCTAACCTAA TGGACCCATG GTATAGCGCA CTCGCGGGTA CAGGGTTGCC CATCGTCGTT
GGCGAAATGG GAGTGGCGCT ATCAGATGAT GACGAAGCGA AGCGCACGTG GATGACAGAA
TTCCGTGATT CACTAGTCAA TCAATACCCG CGTGTAAAAG CGTTTAACTG GTTTGATATT
GATAAGGGGT GGGTAAATAA CGAGGCCAAT TACCATATAG AGTCAGGTAA TGCCGGGCCT
CATTTCAATC AATTAATGAC CGACCCTCGT TTTGTTGGCT CGTTTGGTTC GGTATTTATT
AAAAATAAAG CAAACAATAA ATGCCTCGCA ATTGCCGCTA ACAGCAATTC AAACACTGCC
AATGTTGAAG CTGCAGATTG TAATGGTGCT GCAAACCAAG TGTTTACTGT AACGGATCTG
GGCGACTTTA AACTGGAGCT TCGGGCGCTT AACAGCGATA AGTGTGTAGA TGTGGCTGGC
GCAGCTTCCG GTGATGGTGC CAACATCCAG CAGTATAGTT GTAATGCGAG TAAGGCCCAA
GTTTGGGTGA TGAATGTTAT TAATTGGTCT ACGATGGAAG TAGAGCTTTC TGCAGAAAAC
TCAGAGAAGT GTTTAGATCT AGATATGGCT TCATCTAATG TTCAGCAGTG GCAGTGTTAC
TCAAACATAA ACCAACGCTG GTTTTTAAAA ACAACCCCTA ACGCACCGGT TCAATTAGAT
CCGCCAAGCA TTAGCGGTAT CTACGAGCTA AAAAATACTG CAACTAATCG TTGTTTAGAT
ATAGCGGGCG GTTCACCCGA TACCGAGGCG AATGCACAAA CATGGTCTTG CAATGGTTCC
AGTGCACAGC GTTTTAAAAT TGTTGATCTT GGTGGCTATA GGCTTCTACT TCGGCCGCTA
AGTAATACTA ACGTCTGCAT AGATGTTTCT GATGTAAGTC AAGCTAATGG CGCTAATGTA
CATCAGTGGA CGTGTAATGG TGGCAATAAT CAGACGTGGA AGGTTGATGT TAAGAACTGG
GCTACCATGG AAGTAACGCT TTCTGCTGCG CATTCAAACA AATGCCTCGA TGAAGATCAG
GGCTCTAATA ATGTACAGCA GTGGGCGTGC AGTAATGCTA ATAACCAAAT TTGGAAATTA
GATGTTGTGA ATTAA
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| Protein sequence | MIKINSNQSF LVSMLAPVVL AFSAITYAAE PASDRIYMGA FTDRNWSESN PCGDKQTEHW
EWNQNSQWFG NTNAYFGKIF PEWFLPDGAP NIYQNWKVEV ERIKAQGRIP YINWEAHGQT
QDGECWHGGN GQNARADRDV ISEINAGQHD DLIENLAIGL REEKTKIVID LFHEMNGAWY
DWSPSCKHSA GWPAWRQAFK HVVDIFRANN AYNVEFGTSV WFGADICGNG IQDTVDNINI
PGYLDWIGID IYGDVYGNSF SNLMDPWYSA LAGTGLPIVV GEMGVALSDD DEAKRTWMTE
FRDSLVNQYP RVKAFNWFDI DKGWVNNEAN YHIESGNAGP HFNQLMTDPR FVGSFGSVFI
KNKANNKCLA IAANSNSNTA NVEAADCNGA ANQVFTVTDL GDFKLELRAL NSDKCVDVAG
AASGDGANIQ QYSCNASKAQ VWVMNVINWS TMEVELSAEN SEKCLDLDMA SSNVQQWQCY
SNINQRWFLK TTPNAPVQLD PPSISGIYEL KNTATNRCLD IAGGSPDTEA NAQTWSCNGS
SAQRFKIVDL GGYRLLLRPL SNTNVCIDVS DVSQANGANV HQWTCNGGNN QTWKVDVKNW
ATMEVTLSAA HSNKCLDEDQ GSNNVQQWAC SNANNQIWKL DVVN
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