Gene Sde_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_3004 
Symbol 
ID3967765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3832627 
End bp3832881 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content51% 
IMG OID637922101 
ProductRebB protein 
Protein accessionYP_528473 
Protein GI90022646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000250436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTACC CAACGTCTGT TAATGGGCAA ATTACCGATG CGGTTACCCA GGAGAATGTG 
AAGGTGCTTG GTGAGGCGCC AGCTGTGGCT ATGGGGAATT TGTATCACAC TATTGGTAGC
TCTGTTGCTA TGGCGGCCGC GAATGCGGTG TACGCGCAGC AGCAGGCGAA TGTGATCTAT
CAGGCTGCAA CGGTTATTGG TATTAATACG TTGGCAGCGG CGTGGAGTAC TGTTTTACCG
CCGGTAGATA AATAA
 
Protein sequence
MNYPTSVNGQ ITDAVTQENV KVLGEAPAVA MGNLYHTIGS SVAMAAANAV YAQQQANVIY 
QAATVIGINT LAAAWSTVLP PVDK