| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2994 |
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| Symbol | |
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| ID | 3967755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3811820 |
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| End bp | 3813265 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922091 |
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| Product | glucosylceramidase |
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| Protein accession | YP_528463 |
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| Protein GI | 90022636 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.389806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000219808 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTTAC TAAAAAATAT AAATAAGCAA CGCCTAGCAC GTAAAGTTAA ACTCGTCTGT
AGCGCGATAA GCCTAGTGGT TATGGGGTTC AGCTGTGCCG CGTCAGCCAA TCAATACTGG
TTAACCAGCG GTGATCTAAG TGCGGCGTTC GAAGAGCAGG GCGAAAAGTA CGCGGTAGCT
CCCAGCCCCG AAATGCCCCT TATTACCATA GATAAAAGCC AAGCATTTCA AACCATGGAA
GGCTTTGGCT ATACCCTTAA TGGCGGCAGT GCAACTCACC TAGCCAATAT GAGTGACGCA
GCTAGAGCGC GGCTATTACA AGAAATATTT GGTCAAAGTG ATGGTGCGAA TACTAATAAG
CCCAGTATTG GCGTGTCTTA TTTGCGTTTA AGCCTAGGCG CATCAGATTT AGACCCCGCC
CCGTTTAGCT ACAACGATTT GCCGCCTGGC GAAGTGGATT TAAAGCTAGA AAAATTTACT
ATCGCCCAAG ATGAAAAAAC TCTTATCCCC ATACTTAAGC AAATATTAGC TATTAACCCA
AATATTACAT TTATGGCTAG CCCTTGGTCT CCGCCTGTAT GGATGAAAAC AAACGGCTCT
ACCATTGGTG GTGAGCTAAA CCCAGAATAC TACAGCGTAT ATGCACAATA TTTTGTTAAA
TATGTTCAAG CAATGGCTGA GCACGGCATA AACATAGATG CCATTACTAT TCAAAATGAA
CCTATGCACC CGGGTAATAA CCCAAGCTTG CTCATGCATG CAAAAGATCA AGCCGACTTT
ATTGCTAATC ACTTAGGCCC CGCGTTTAAG CAGGCAGAGC TAAAAACAAA AATCATTGTG
TGGGATCACA ACGCAGACAA ACCCGAATAC CCCATAGAGG TACTGAATCA CCCCGTTGCC
AATCAATATA TTCACGGCTC GGCATTCCAT TTATATGGCG GCGATGTAAA TGCCATAAGC
CAAGTGCACA ATGCTCACCC AGATAAGCAC TTATATTTTA CTGAGCAGTG GGTAGGCGCA
AATTCCAACT TTTGGGGCGA TGTAGCTTGG CATGTAGAAA ATTTAATTGT TGGGGCAACC
CGCAATTGGT GCAAAACGGT ATTGGAGTGG AATTTAGCCG CAGACAGTAA CTTACAGCCT
CACACTCTTG GTGGATGCGA CGCCTGCTTA GGCGCGCTAA CTATTGATGG CGATAACGTG
AAGCGCAATG CCGCGTATTA CATTATTGCC CACGCAGCTA AACATGTACC GCCAGGCTCG
GTGCGTATCC ATTCGCACCG TGTGGCGGGT TTACCTAATG TTGCTTTTCT TACGCCGCAG
AAAAAGGTTG TTGTAGTAGT GCTTAATAAT ACTACTCAAT TACAGTCATT TACATTGGTG
CACGACCGTC AAAAGTTTGC CTATTCCATG CCCGCACAGA GCGTTGTAAC GCTAGTTATA
GATTAA
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| Protein sequence | MTLLKNINKQ RLARKVKLVC SAISLVVMGF SCAASANQYW LTSGDLSAAF EEQGEKYAVA
PSPEMPLITI DKSQAFQTME GFGYTLNGGS ATHLANMSDA ARARLLQEIF GQSDGANTNK
PSIGVSYLRL SLGASDLDPA PFSYNDLPPG EVDLKLEKFT IAQDEKTLIP ILKQILAINP
NITFMASPWS PPVWMKTNGS TIGGELNPEY YSVYAQYFVK YVQAMAEHGI NIDAITIQNE
PMHPGNNPSL LMHAKDQADF IANHLGPAFK QAELKTKIIV WDHNADKPEY PIEVLNHPVA
NQYIHGSAFH LYGGDVNAIS QVHNAHPDKH LYFTEQWVGA NSNFWGDVAW HVENLIVGAT
RNWCKTVLEW NLAADSNLQP HTLGGCDACL GALTIDGDNV KRNAAYYIIA HAAKHVPPGS
VRIHSHRVAG LPNVAFLTPQ KKVVVVVLNN TTQLQSFTLV HDRQKFAYSM PAQSVVTLVI
D
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