| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2991 |
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| Symbol | |
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| ID | 3967752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3801424 |
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| End bp | 3804465 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637922088 |
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| Product | hypothetical protein |
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| Protein accession | YP_528460 |
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| Protein GI | 90022633 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000283322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000325565 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAATA ACAATAAAGA GGCTAGACAA GTGAATACAA CCGAGAGAAC CCCTAGTAAC
GGACGCTTTA GAAAGTCGCT TCTAGTAAGT GCTATCGCTG CTGTGTCCTG TATTAACGTT
GCGCATGCAC AGGAGTCGGA AGGTCAGCTT GAAGAAGTTG TTGTTACCGG CACGCGCGCA
ACAATCCAAT CTACGATCGA TATTAAACGC AATTCCACCA CTATTGTTGA TGGTTTATCT
GCTACCGATA TTGGTGATAT GCCAGCGCTT TCTATTGGTG AGGCGTTAGA GAATATTACA
GGTGCTGCTT CTCACCGTGA GAACGGCGGC GCAACCGAAA TTTCTATTCG TGGTCTTGGC
CCATACTTGA GCGCCACTAC CTTTAACGGC CGCGGTGCTA CCAATGGTAG TGGTGACCGT
TCTGTTAACT TCTCTCAGTT CCCATCTGAA TTAGTAAACA AAATTGCAAT TTACAAAACC
CAAGACGCCA GCCTAATTGA AGGTGGTGTT GCTGGTTTGA TTGCATTAGA AACTGTTAAG
CCTTTGGAAT ACGGTAAGCA ACGTATCCAG GTTGATGCCA AATTAAACTT CAACCCTAAT
CAAGCAAATA TTGACGACCC AATGAACGGT AACTTGGGCT TCCGTGGCAC GGTAAGCTAT
ATTGATCAGT TCGAAATTGG TGATGCCGCT TTGGGTGTGT CTTTGGGTTA CCAGAAGAGT
GATATTTCTC AGCCAGAATC TGAGATGCGT TCTTCTAGCC CGAGTGGTTC ATCTTTGTAT
GCTTGTTTGT ATGATCCAGA TATTAGTGCT GGTTTTTATC GCACGAGCAG CGGCGATTGC
AATTCTGGTG GCACCTATAA CACTACGAAA GATCCTGAAA CGGGTAAGGC TGTAAATGAT
GGCAGCCCTT ACGGCTTTGC CCCTAGCTCT AATGGCTACC GTCAAAATGA TACGGCTGAT
GAGCGTGATG CGGTTTTTGC TGCGATTCAG TTCCAGCCTA CAGATAAGCT AGATATTAAT
TTAGATGTGC AGCAGTCGAA GCGTGTTCAA GCTGAGCAGC GTCACGACTT AAACTTCGCT
AACATGAGGC GTGTTACGCC AGGCATCACT GATCAGGCTG TTGTAATTAG CAGTACTGGT
GCCGTTACTA GTTGGGCTGG CGAAACTGCT ATCGAATCTA ACAGCGAGAC ATACTCTCGT
ACTGAAGAGT ATTTGGGTTA TGGTTTGAAT GTTGCTTACG AGCTAACCGA CGACATTACT
ATTTCTGGTG ATTACTCTTT CTCTGAAACG ACTCGTGAAG AAGTGCAGTA TTTATTGCGT
ACTCAATCGA ACAACGGTGA TGTGAATGGT GACTCATCTT CTTACCGTCC TTTGGTTGCT
TGGGATATGG ATTCAGGTAT TCTCCAATAT GCTGTGTTAG ATTTTGACGT TACCGATCAT
GCCGTATTCT CAGATGAATA TCGTGTACGA ATAGATAATG ATGTTGACCG AACTAACACT
GCTACCGCAT TCCGAGCGGA TATTGATTGG CGTGTGAGCA CAGATTTTAT TACATCTGTT
AAGGGTGGTA TACGATACTC AGAGCTAGAA TACCTAGACT TGGGTAGCGC GCGTAATGAA
TTCGAAGTTG ATCGCAATAA CGTTAACCCG GAGACGAAAG CGTTAGATGT TGCAGCGATA
TCTGCGGTGA ATACAGCATG TGCTATCGAT TTCCCAGAAA GTAACTTCCT AAGTAGCGAG
CGAAGCGGCG ATTTAGTTAC TCAACTTGCT AGTGACGGCA GCGTGGTTGG TAGTTCGAAT
AGTTGGGCGA CGTTTGACAC TGTATGTGCC GCTCAAATGA TTGCAAATTA TCGCGGTGAA
AGTTTGGAGT ACCCTGAGCT AGAAGATGGT ACCTCTCAAG TTACAGACGT TACCGAAATG
ACTACTGCTG CGTACGTAAT GGCGGACTTT GAAACTTCAC TTGCTAACAC TCCTGTTCGC
GGTAACTTTG GTGTACGTGT AGTGCAAACA GAAGTTGAAT CTGTGGGTTA CCGTACAGCA
TTTAACGTTG TAACAAACGA TTCTGGCACT TTGAAGTTAG AGCGTACCGG AGATACAGAG
CAAGTAACTG CAGGTGGCGA TTACACTGAG TTGTTGCCTA GCGTAAACGT GATTGCAGAC
CTTACTGATA ACTTGATGTT ACGTGGTGCT GTCTATCGTG GTCTATCACG CCCAGATCCT
GCTGATCTTG GTTACAAGCG TGATTTCGAT GAGAACACCG AAGACGATAT TACCGACGTA
AATCAGTTAA TCGATAGTGT TGATGGCGAC GGCAATCCCA ATATGCAGCC GCTTACTTCG
TGGAACTTTG ACGCCGCTAT CGAGTGGTAT GCGAACGACG ATACTATGTT AGGTTTCGGT
GTTTACCATA AGAAATTCCA GGGTGGTTTC GAAACCATTC GCACTACTGA GAGTTTCTTA
ATAGACGGTG TTAGCACTCA AGCAGAATTT GATCTTGTTA GCACGAACGA AGAAACGAGT
AACTTAACTG GTTTTGAGCT TAACGCTTCA CACAACTTCT CTTACTTGCC TGGCTACTGG
AGTGGCTTGG GTGTGAAGGG TAGCTTCAAC CACGCGATCT CAGATTTCGA GTTCGAAGAT
AGCAACTACG GTGATATCAC TAAGACGGAT GAGGATGGCA ATATCGTTGA GGAATACATT
GGTATAGTGG AGCCTGGTAA CGTACCAGGC TTCTCTGAGA ATGTATTCTC TGGTCAGATC
TACTACCAAA TTGGTGAGTT AGACACGAGC TTAATCTATA AGTACCGCAG CGAGTACTTC
CAGCCATACA CAAGCAATGG TACGCGTTTG CGTTATGTTA GCGATGTGGG TGTGTGGGAA
GCGCGTGTTT CTTACAAGCT AACCAAAAAC GTGAAGTTAA GCTTAGAAGC TATCAACTTG
TTTGATGAGC CTAAAAAGCA ATACTTCTAC AGCCGCGACA ACTTAGGCGA GCTAAACAGC
TACGGCCCAC GTATATTCGT AGGTGTTAAA GCTAAGTTTT AA
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| Protein sequence | MRNNNKEARQ VNTTERTPSN GRFRKSLLVS AIAAVSCINV AHAQESEGQL EEVVVTGTRA
TIQSTIDIKR NSTTIVDGLS ATDIGDMPAL SIGEALENIT GAASHRENGG ATEISIRGLG
PYLSATTFNG RGATNGSGDR SVNFSQFPSE LVNKIAIYKT QDASLIEGGV AGLIALETVK
PLEYGKQRIQ VDAKLNFNPN QANIDDPMNG NLGFRGTVSY IDQFEIGDAA LGVSLGYQKS
DISQPESEMR SSSPSGSSLY ACLYDPDISA GFYRTSSGDC NSGGTYNTTK DPETGKAVND
GSPYGFAPSS NGYRQNDTAD ERDAVFAAIQ FQPTDKLDIN LDVQQSKRVQ AEQRHDLNFA
NMRRVTPGIT DQAVVISSTG AVTSWAGETA IESNSETYSR TEEYLGYGLN VAYELTDDIT
ISGDYSFSET TREEVQYLLR TQSNNGDVNG DSSSYRPLVA WDMDSGILQY AVLDFDVTDH
AVFSDEYRVR IDNDVDRTNT ATAFRADIDW RVSTDFITSV KGGIRYSELE YLDLGSARNE
FEVDRNNVNP ETKALDVAAI SAVNTACAID FPESNFLSSE RSGDLVTQLA SDGSVVGSSN
SWATFDTVCA AQMIANYRGE SLEYPELEDG TSQVTDVTEM TTAAYVMADF ETSLANTPVR
GNFGVRVVQT EVESVGYRTA FNVVTNDSGT LKLERTGDTE QVTAGGDYTE LLPSVNVIAD
LTDNLMLRGA VYRGLSRPDP ADLGYKRDFD ENTEDDITDV NQLIDSVDGD GNPNMQPLTS
WNFDAAIEWY ANDDTMLGFG VYHKKFQGGF ETIRTTESFL IDGVSTQAEF DLVSTNEETS
NLTGFELNAS HNFSYLPGYW SGLGVKGSFN HAISDFEFED SNYGDITKTD EDGNIVEEYI
GIVEPGNVPG FSENVFSGQI YYQIGELDTS LIYKYRSEYF QPYTSNGTRL RYVSDVGVWE
ARVSYKLTKN VKLSLEAINL FDEPKKQYFY SRDNLGELNS YGPRIFVGVK AKF
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