Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2979 |
Symbol | |
ID | 3967818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3785987 |
End bp | 3786622 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637922076 |
Product | glutathione S-transferase |
Protein accession | YP_528448 |
Protein GI | 90022621 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.978891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.125467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAT TGTTTTACTA CCCAAGAAAT GCCAGTTGGG CGCCCCATAT GGTGCTAAAG GAAATGGGTG TGGCGTTTGA GTTGGAGCTG GTAGATAGAA AGCGTGAGCA GCAAAAAACC ATGGCTTATA TGCAGCTTAA CCCTACTGGG CGCATTCCTA CGTTAGTGGA TGGCGATTTG GTTATGCACG AAAGTGCGGC AATTTGTTTA CACCTTTGTG AAAAGCATCC CCAAGCTGGC TTAATTCCCG AAGTGGCTAG CCCGAACAGA GCGCTATTTT ACCAATGGCT GTTTTATCTG AATTCTACCG TGCAGCCAGA ATTAATGGTT TATTTCTACC CGCAAAAACA CACCACCAGC GATAACACTG CAGCCATTAA GCAAGCGCAA GAAGCGCGTG TAACAGATAT GTTTGCCTTT ATAGATAGTA AGCTAGAAGG TAAAGAGTAT TTAGTGGGCA GTAGCCTAAC TGTATGCGAC TACTTTTTAT TTATGTTGGC GCACTGGGCA AGCGGTTTTA ATAAACCACC ACTTGGCTAT AAGCATTTAG GTGGCTATTT GCGAATGCTG GCGAAGCGAG AGGCGGTAAT GGCTGTGAGT AGTTCTGAGG GGACAGATTT AACGGCTTAT ATTTAA
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Protein sequence | MYKLFYYPRN ASWAPHMVLK EMGVAFELEL VDRKREQQKT MAYMQLNPTG RIPTLVDGDL VMHESAAICL HLCEKHPQAG LIPEVASPNR ALFYQWLFYL NSTVQPELMV YFYPQKHTTS DNTAAIKQAQ EARVTDMFAF IDSKLEGKEY LVGSSLTVCD YFLFMLAHWA SGFNKPPLGY KHLGGYLRML AKREAVMAVS SSEGTDLTAY I
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