Gene Sde_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2979 
Symbol 
ID3967818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3785987 
End bp3786622 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID637922076 
Productglutathione S-transferase 
Protein accessionYP_528448 
Protein GI90022621 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.978891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.125467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAT TGTTTTACTA CCCAAGAAAT GCCAGTTGGG CGCCCCATAT GGTGCTAAAG 
GAAATGGGTG TGGCGTTTGA GTTGGAGCTG GTAGATAGAA AGCGTGAGCA GCAAAAAACC
ATGGCTTATA TGCAGCTTAA CCCTACTGGG CGCATTCCTA CGTTAGTGGA TGGCGATTTG
GTTATGCACG AAAGTGCGGC AATTTGTTTA CACCTTTGTG AAAAGCATCC CCAAGCTGGC
TTAATTCCCG AAGTGGCTAG CCCGAACAGA GCGCTATTTT ACCAATGGCT GTTTTATCTG
AATTCTACCG TGCAGCCAGA ATTAATGGTT TATTTCTACC CGCAAAAACA CACCACCAGC
GATAACACTG CAGCCATTAA GCAAGCGCAA GAAGCGCGTG TAACAGATAT GTTTGCCTTT
ATAGATAGTA AGCTAGAAGG TAAAGAGTAT TTAGTGGGCA GTAGCCTAAC TGTATGCGAC
TACTTTTTAT TTATGTTGGC GCACTGGGCA AGCGGTTTTA ATAAACCACC ACTTGGCTAT
AAGCATTTAG GTGGCTATTT GCGAATGCTG GCGAAGCGAG AGGCGGTAAT GGCTGTGAGT
AGTTCTGAGG GGACAGATTT AACGGCTTAT ATTTAA
 
Protein sequence
MYKLFYYPRN ASWAPHMVLK EMGVAFELEL VDRKREQQKT MAYMQLNPTG RIPTLVDGDL 
VMHESAAICL HLCEKHPQAG LIPEVASPNR ALFYQWLFYL NSTVQPELMV YFYPQKHTTS
DNTAAIKQAQ EARVTDMFAF IDSKLEGKEY LVGSSLTVCD YFLFMLAHWA SGFNKPPLGY
KHLGGYLRML AKREAVMAVS SSEGTDLTAY I