| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2972 |
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| Symbol | |
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| ID | 3967811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3775949 |
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| End bp | 3776695 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922069 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_528441 |
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| Protein GI | 90022614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.85607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.195493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTCTA CAACAGATTT TACACTTTCT ATTGAGGGGT TAACGGTATC TTTCGACGGC
TTTAAAGCCG TAGATGATTT AAACCTCTAC ATAGATAAAA ACGAGTTACA TGTTGTTATT
GGCCCGAATG GCGCGGGTAA AACAACCGTA TTGGATTTGA TTTGCGGCAA AACAAAATCC
ACCTCCGGCA GTATTAAGTT TTTAAACAAG GAACTCACCA AAATGAGTGA GCACGCCATA
GTGCGAGCGG GGGTAGGGCG TAAGTTTCAA ACACCATCAA TTTACGAGAA CTTAACGGTG
CTCGAAAATT TAGAGGTGTC TTACCCCGCA GGACGTGGGG TTTTAGGCTC GCTAGTCTTT
AAACGCTCTA CAGCCGTGCT GCAAAAAATT CACGAAATAG CAGCCGAGAT AATGCTGGAT
GATCAGCTAG ATACAGAGGC AGGTTTGCTT AGCCACGGGC AAAAGCAGTG GTTAGAAATA
GGGATGTTAC TTATTCAAGA CCCGCAGTTG CTAATGCTAG ATGAGCCAGT AGCCGGCATG
AGTGTTAAAG AGCGCGAACA AACAGGCGAA TTGTTGAAGA AAATTAGCAA AGGGCGATCT
GTACTAGTTA TTGAACACGA TATGGAGTTT GTTGCGCGTA TAGCGCAGAA GGTAACGGTA
TTGCATCAGG GTAAGATTTT AGCCGCGGGC AATATGGAGA AAGTGCAGTC CGACCCGAAA
GTGATCGAAG TGTATTTAGG GCATTAA
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| Protein sequence | MSSTTDFTLS IEGLTVSFDG FKAVDDLNLY IDKNELHVVI GPNGAGKTTV LDLICGKTKS
TSGSIKFLNK ELTKMSEHAI VRAGVGRKFQ TPSIYENLTV LENLEVSYPA GRGVLGSLVF
KRSTAVLQKI HEIAAEIMLD DQLDTEAGLL SHGQKQWLEI GMLLIQDPQL LMLDEPVAGM
SVKEREQTGE LLKKISKGRS VLVIEHDMEF VARIAQKVTV LHQGKILAAG NMEKVQSDPK
VIEVYLGH
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