| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2952 |
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| Symbol | |
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| ID | 3967830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3752548 |
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| End bp | 3753225 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637922049 |
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| Product | parallel beta-helix repeat-containing protein |
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| Protein accession | YP_528421 |
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| Protein GI | 90022594 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.366073 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTT GGTCTCAGCT AGGAACGGCT AGCATCCCCA ATAATGGCGG CGAATTACGG
CTTGCCCAGC GCGAAAAAGA GTTTTCTATA TCGCTTAAAG GTGTGCGCGG TGAGTTAATG
AATAGCCGTG TTCACTGCTC TGAAATTGCT TTAGCAGATT TAGGGTGTGC CCATATAAGT
GGTGCAGACA ATACCGCGGT GCTCGTAGGG GGCATGGGTA TGGGCTTTAC GTTGGCGGCA
GCGCTTAAAG CCACCAGCAA CAGTTGTGTA GTAACAGTGG CAGAGCTTGT GCCTGAAGTT
ATTGAATGGA ACAAAGGTGC GCTGGGCGAA TGTGCGGGCT ACCCCATTAA TAACCCTCGC
ACCCGCGTGT GCCTACGGGA TGTTGCAGAC ATGTTCACCC CTCAGCGGCC CACCTTCGAT
GCAATTTTAT TAGATGTGGA TAACGGCCCA GAAGGCTTCA CGCATGCCGA CAATACGAGC
TTGTATTCGC TGGCAAGTTT AAATGCAATT CACAACACCT TGCGCCCTAA GGGCGTGTTG
GCTGTGTGGT CTGCTTGGCA CGACCCAGCA TTTACCACCC AGCTTAAAAA AGCCAAATTT
AAAGTAGATG TTAAAACGGT GCGCGCACAT AAAGGTAAAG GAAGCCGCCA CACCATATAT
TTAGCGAAAA GAAACTAA
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| Protein sequence | MIPWSQLGTA SIPNNGGELR LAQREKEFSI SLKGVRGELM NSRVHCSEIA LADLGCAHIS
GADNTAVLVG GMGMGFTLAA ALKATSNSCV VTVAELVPEV IEWNKGALGE CAGYPINNPR
TRVCLRDVAD MFTPQRPTFD AILLDVDNGP EGFTHADNTS LYSLASLNAI HNTLRPKGVL
AVWSAWHDPA FTTQLKKAKF KVDVKTVRAH KGKGSRHTIY LAKRN
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