Gene Sde_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2945 
Symbol 
ID3968035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3741550 
End bp3742395 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content39% 
IMG OID637922042 
Producthypothetical protein 
Protein accessionYP_528414 
Protein GI90022587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.27251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA GACCGGGAAC AGTTTCAAAA ATTCTTTGGC ACTTCACTGG AGGTCCGCAA 
TGGGACTCTA AGAAAAATAA GCAACTAAAA AAGTTAAAGC CGGCGGCGCA AGGTTACAAT
GCCCTCAAAG CCATTCTTGA CTCAAAGGAG CTAAGGGTCG GTAATTATCA AGAGATTGTT
AAAGTTATTG TTCCCGAAAA GCGTAGTTAT AATCTAGATA CAAAGAAGGT CGAAATACGA
AAAAATGTGC CAGTAACAGT AAAATCTAAG CCTGTTTGTT GTGTTGCGGA TATTCCGCTT
CAACATCTAG CCTACCATTC GAATAGGTAC GGTAAAATTG CAATAGGATT TCACCGAGAT
TCAATTGTTA AGGCGGGTTT TAATCCAGTT CTTTATACAC TAGAGGATAC CTCGTTACTT
AATGCAATAT ATCAAGGTTA CTACTCAGTT GATGATGTCT TAACGGATGA AGCTGAAAGT
GAAGTTGATA GTCTGCAGGG ACAGATTGAT GGCATTATTG AAGAGCATGA ACTAGATGAA
TACATTGACG CGTCTGACAT ATTAAGCGCG TTGAGCTTTA TAGAGTCAGG TCACTCTAAA
ATAGAAAGCA GCTTTGAAAC ATTCATGGCA TACATTAAAA CATTTGACAC CTCAGAGTTT
GATTCTATTT ATTGTGAAAG AGAGTGGCGG TCAACCTGCA ACTTTAAGTT TAAGCCTGAA
GACATTGCTA TGATAATAGT CCCTAAAAAA CAGGGTAATA CCAATTTCTA CAAGAAATTC
CTGAAGGAAA TGAATTTACC AAGAGATTTG GTTGTTGCTT GCTGGGAGGA CTTGATCGAA
CACTGA
 
Protein sequence
MSFRPGTVSK ILWHFTGGPQ WDSKKNKQLK KLKPAAQGYN ALKAILDSKE LRVGNYQEIV 
KVIVPEKRSY NLDTKKVEIR KNVPVTVKSK PVCCVADIPL QHLAYHSNRY GKIAIGFHRD
SIVKAGFNPV LYTLEDTSLL NAIYQGYYSV DDVLTDEAES EVDSLQGQID GIIEEHELDE
YIDASDILSA LSFIESGHSK IESSFETFMA YIKTFDTSEF DSIYCEREWR STCNFKFKPE
DIAMIIVPKK QGNTNFYKKF LKEMNLPRDL VVACWEDLIE H