Gene Sde_2943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2943 
Symbol 
ID3968033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3739440 
End bp3740417 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID637922040 
Producthistidine kinase 
Protein accessionYP_528412 
Protein GI90022585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC CCAGAAAAAT GCAGGTTTCG TTAGACGCCA CACCTTATTA TCACTGCACC 
TCACGCTGCG TGCGCCGTGC TTTTTTGTGT GGTTACGATG CCCTTACAAA CACAGACTAC
GAACACCGCC GCCAATGGGT GGAAGATAGA ATTCACCTAC TAGCCGAAGT CTTTTGCTTA
GATGTTTGCG CCTATGCGGT AATGTCTAAT CACTTGCACC TTGTACTTCA TATCAACCAA
CCAAAAGCGC TAGCACTTAC CGCTAAAGAA GTATGCGCCA GATGGCACCG CATATATAAA
GGCACACTAC TTACCCAAAA GTACGAGAAA AACGAAAATT TAACAGACGT AGAGCTAGAC
GCAGTAGCCA TAAAAACTGA GCTGTGGCGC GAACAGCTAT TTGATATTAG CTGGTTTATG
CGCGCCCTAA ATGAACCCAT TGCCCGCATG GCAAACGCAG AAGACCACTG CACTGGCAGT
TTTTGGGAAT CGCGCTTTAG CTCGCAAGCA CTGTTAGATG AAAAAGCACT TGCCGCGTGC
ATGGCATACG TAGACTTAAA TCCAGTGCGA GCCAAAATGG CCGATACGCC AGAAAACTCC
GTACACACTT CTATTAAACT TCGTGTAGAC CAAATAGCTT ACAACCAAAA CCAACCCAAA
ACCCTCTACC CTTTTGTGGG CAACCCACGC CAAACAATGC GCGACGGCCT ACCATTTAAA
TTAAACGATT ATTTAGAACT AGTAGATTGG ACTGGGCGTG CGGTGCGATC GGATAAACGC
GGTAACATTA GCCAGCACCT ACCGCCAATT CTTACACTGC TAGGCATAGC GCCTGCTGAA
TGGCTAATTT TAACTACTCA ATTTGAAAAA CGGATTTCGA CTTTTGCAGG TTCCGAAAAT
GCTATTCGGT TAGCAGCTGA AAATCTTGGT TATAAAAAGC CACCGGGTAT CAGTTTGGCT
AGAAGTTTGT TTGTATAA
 
Protein sequence
MPKPRKMQVS LDATPYYHCT SRCVRRAFLC GYDALTNTDY EHRRQWVEDR IHLLAEVFCL 
DVCAYAVMSN HLHLVLHINQ PKALALTAKE VCARWHRIYK GTLLTQKYEK NENLTDVELD
AVAIKTELWR EQLFDISWFM RALNEPIARM ANAEDHCTGS FWESRFSSQA LLDEKALAAC
MAYVDLNPVR AKMADTPENS VHTSIKLRVD QIAYNQNQPK TLYPFVGNPR QTMRDGLPFK
LNDYLELVDW TGRAVRSDKR GNISQHLPPI LTLLGIAPAE WLILTTQFEK RISTFAGSEN
AIRLAAENLG YKKPPGISLA RSLFV