| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2939 |
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| Symbol | |
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| ID | 3968029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3734083 |
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| End bp | 3736446 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637922036 |
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| Product | ATPase |
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| Protein accession | YP_528408 |
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| Protein GI | 90022581 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4880] Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGGA AATTAAATTT TATTTTAGCG CCGCTTGGTA TGGTGTTAGG CGTTAACACC
TATGCGGATG TGTCGTGCGC TGTTTCTGGC AGCGTGTGGA ACAATGGCTA TGTAGCTAAT
GTTGCAGTTA CTAACGCGGG TGAATCTCTG CAAGAGGGTT GGAGTGTTGC TTTGTTGTTC
GATAACACTC CAACTATAAA CAATAGTTGG AGTGCGGAGC TTGCTGTAGA CGGTAATGTG
CTAACCGCGA GTAATGTGGC TTGGAACGCT AATTTGGCAG CGGGGCAATC TGCTCATTTT
GGTTTTGTTG GCTCATATTC AGGTGAGTTT GAATTGCCTG AATGTTTCGT TGGCGCACTA
GATGATGACA CTGCACTCGA AGATTATTTA AAACAGGGCG TGCATAATCA TTTAAATTTA
CGCATTGCAA ATTCGGCGTC TGGTTCATCT AGCTCTTCGA GCTCTTCCGG TGCGTCCAGT
TCTTCCAGTT CATCCAGTGC TTCTAGCGCA TCGAGTACAT CTTCTGGTTC GCCCGTGGCC
GAGCCCGATA CTCAGCCTGA TGATATTACC AATACCCAAG AAGATGGCGT GGATGAGGCG
GATATAATTG AATCCGACGG TAACCACTTC TTTGTGGTGC GTTCTTCTTT ATATTTTACC
GGCACTAGCT CATCAACCTC TGGCTCTAGT TCTAGTTCGG CTTCATCTAG CGGTTCAGGT
GGGTATGGCG ATTACACACA GGGAGTGTTG ATTGAAGCCT ACAGTAAAGA TTCAGCAGCC
GGAACAACTC AACATGTGGG GCAGGTGACG TTGCCCTATG AAGAAAATTA TCTTCACGTT
TCTGGTGCTT ACTTTCGCAA AACACCGCAA GGCAATAGAT TAGCTATTGT AAGTAACACC
AGAGAATCAC AGCCTTATTA TTGGAGCTAT GGGTATGGTT ATTACCCCTA TTATCAAATT
TCTAATAAGG TAGCTATTTC TGTTGCTAAT ATTGATACCC CTGAATTAAT GGACGAGGCA
GAGCGAATTA CTTTTGATGG TGATTTAGTA TCGAGCAGAC GTATTGGTAG CAAATTATAT
ATTGCCAGCC GTTATAGCCC GAACCTAAAT CGTTTAGGGT TTGATTTTTC TAGCAGCGCG
AGCAATGAGG AAAATGCACA GCGTTTAGAT GAAGCGCCCC TTGCGGATTT ATTGCCACAT
GTTTACGACG AAAATGGCGT AGGTACGCCT TTGGTTACTG CTGCTGACTG CACCGTACCG
GAGTGGCCAG AAAGCGTGGA TGTATATGCC GGGTCACTGT TGGTTATTAC TCAAATTGAC
TTGGATAATA ACTTAGCAAT TAGCTCGCGT TGTTTACCTG CTTCGGCAAC AGAAATATAC
AGTTCTGCGG ATGCAATTTA TGCTTTCTCC AATGCATTTT ATGCTGGGGT AAAAGTGCAT
AAATTCACAT TAAAAAATGA TGCCCAAGAA AGTGAAATTA GCTATAAGGG TAGTGTTAAG
TTGCCGGGTT TTATAGCTTG CAGTAATCAA TCTTATTGCT TTGGCGAGCA AGACGGGGCA
TTGCGCGTTT TGTATAGAGT GTCCAATTAC AGTGATGCTA CTCCCTATCG TATTGCGGTA
ATTAAGCAAT CGCCAAGCTC TGCAGAAGGT TTAGACATTA TAGCTACCTT GCCAAATGCT
GAACGCCCAG CCTCTATTGG TAAGCCGGGC GAGATTGTTT ATGCCATGCG TAGTTTTGGT
GATCACGCTT ACGTCGTTAC TTTCGATAGA ATTGACCCGT TATATGCTAT TGATTTCTCT
AACCCAGCAG ACCCTTACAT TGCCGGTGAG CTTGAGGTTA CTGGTGTGTC TGATTACTTA
CATCCAGTGG GGGAGAATTT ATTGTTGGGC GTGGGCCGAG ATGCAATATT CGACGAAGCG
CGCAATTTAA CTTGGTTTCA GGGTGTTAAA GTGGAGCTGT TTGATGTGAG TGACCCTACA
AACCTGCGCA GCTTAGGCAG TGAAGTAATA GGTAAGCGCG AGTCGTCAAC GACACTTAGT
TTTGATGCCC GTGGTATTGC ATTTAGCCAT GATGAAAACG GTATTCGTTT TGCTATTCCT
GTGAAAATGC ATGATAAGCC AATTGGACCG GCAAATACCG ATGCGTTAAA CCAATATTAT
AGTTGGACCC ATACGGGGTT GTATGTTTAC CAAATAGAAA CGCAGCCAAA CACCGATGCT
AGTTTGTCTC GCTTAGGTAT ACTAAAAACT GATATCGGCG AGGCCAGTGT GCGCTATGAT
CGTGGCGTAA TTGATGGTGA TGCTGTTTAC TATTTGCATA ATTACCACAT GTTTTCGAGC
TTAATCAATT ATTTGGCGCA ATAG
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| Protein sequence | MLRKLNFILA PLGMVLGVNT YADVSCAVSG SVWNNGYVAN VAVTNAGESL QEGWSVALLF
DNTPTINNSW SAELAVDGNV LTASNVAWNA NLAAGQSAHF GFVGSYSGEF ELPECFVGAL
DDDTALEDYL KQGVHNHLNL RIANSASGSS SSSSSSGASS SSSSSSASSA SSTSSGSPVA
EPDTQPDDIT NTQEDGVDEA DIIESDGNHF FVVRSSLYFT GTSSSTSGSS SSSASSSGSG
GYGDYTQGVL IEAYSKDSAA GTTQHVGQVT LPYEENYLHV SGAYFRKTPQ GNRLAIVSNT
RESQPYYWSY GYGYYPYYQI SNKVAISVAN IDTPELMDEA ERITFDGDLV SSRRIGSKLY
IASRYSPNLN RLGFDFSSSA SNEENAQRLD EAPLADLLPH VYDENGVGTP LVTAADCTVP
EWPESVDVYA GSLLVITQID LDNNLAISSR CLPASATEIY SSADAIYAFS NAFYAGVKVH
KFTLKNDAQE SEISYKGSVK LPGFIACSNQ SYCFGEQDGA LRVLYRVSNY SDATPYRIAV
IKQSPSSAEG LDIIATLPNA ERPASIGKPG EIVYAMRSFG DHAYVVTFDR IDPLYAIDFS
NPADPYIAGE LEVTGVSDYL HPVGENLLLG VGRDAIFDEA RNLTWFQGVK VELFDVSDPT
NLRSLGSEVI GKRESSTTLS FDARGIAFSH DENGIRFAIP VKMHDKPIGP ANTDALNQYY
SWTHTGLYVY QIETQPNTDA SLSRLGILKT DIGEASVRYD RGVIDGDAVY YLHNYHMFSS
LINYLAQ
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