Gene Sde_2933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2933 
Symbol 
ID3968023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand+ 
Start bp3724079 
End bp3724705 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID637922030 
Productacetylxylan esterase 
Protein accessionYP_528402 
Protein GI90022575 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00634363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.979732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGTTA TAGGCGACTC TATTACCGCA GGTTACGGCG TAGAAGGTGA AAGCGAACAG 
TGTGGTTACA GTATAGAATC CAGCAACGCG CAAAAGACTT ACGCGGCAAT TACAGCCAAC 
AACTTAAACG CTAGCTTGCA CACATTGGCG TGGTCCGGCA TTGGTGTTTG GCGATCTTAC 
GGCGAACAAA AGCCAGTAAA CCCCACTATT ACCGTGCGCC AACAACGTGC ACTAGCAGAC 
GACCCCAACA GCAAATGGAA CAGTGCGCTA TACCAACCTA ACGCAATTTT AATAAATATT 
GGCACCAATG ATTTCTGGGA ATTTAAAAAA CCAAATATTG TGGCCGAACA GTATAAAAAG 
CACTTACAAA AACTTATAAA TACACTGCGG CAAGATTACC CAACCCAGCC CTATTATTTA 
ATAGTAAGCC CTATGCTGGG TGGCGAAAAA CGGGATTCAC AAAAACAAAT ACTGGCGAGC 
TTCACCAATA GCAATATTGC CGTATTAGAT TTAGGGAAAA TAGAACCCGA AGATGGCCTG 
GGCTGCCACT ACCCCCCAAA CCTAACCACT CAACACCGGC TAGCCACAAA ACTTACAACG 
CGCCTAAAAG CCGATTTAAA CTGGTAA
 
Protein sequence
MLVIGDSITA GYGVEGESEQ CGYSIESSNA QKTYAAITAN NLNASLHTLA WSGIGVWRSY 
GEQKPVNPTI TVRQQRALAD DPNSKWNSAL YQPNAILINI GTNDFWEFKK PNIVAEQYKK 
HLQKLINTLR QDYPTQPYYL IVSPMLGGEK RDSQKQILAS FTNSNIAVLD LGKIEPEDGL 
GCHYPPNLTT QHRLATKLTT RLKADLNW