| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2895 |
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| Symbol | |
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| ID | 3968063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3671272 |
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| End bp | 3672066 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921992 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_528364 |
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| Protein GI | 90022537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0170548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCG ATGCTTATCA AATATTTTCT GCATTCGATT TTTCTAGAAT AAGCCTTTCG
GTGATTATTT TAGTGGTCGC TTTTGTCTTG GCGCGCTCGT GTAAAATATT TTCTAACCGT
CTGTCTCGCG GTTTTCCCGA TTACCGCTTG CGTATAGAAC AGGTAATGAC AACGGTAAAC
TTTATTTTAA TTGTCGGTTC TATTGCACTC GCCATATTTT TACTGTTTCG CAGTAAAGAA
GCCGCTTTTG CCATAGCTGG CTCCATTGGT TTAGCGTTTG CCATCGGCGC TAAAGATGTA
GCCGCTTCAT TGCTCTCTGG CCTTATAGTG CTGTTCGACC GATCGTTCCG TGTGGGCGAC
CGCGTTAAAT TTGCCGACAT TTACGGCGAT GTGTTAGCTA TTGGCGTTAG GTCTACACGA
ATACGCACAT TAGACGATTC CATAGTAACC GTGCCCAACA GCCAATTTAT GAATAGCCCT
GTCATTAGCG CCAACGCCGG CGCACTGGAT ATGCAAGTGG AGGTGGAACT TTTTGTAAGC
CCCGATAGCG ATTTAGCATT GGTTGAACAG CTAGTGCGTG AATCGGCAAT TGCTAGCCGC
AGCATATATT TACACAAACC TATTAAAGTG CTGTTTAAAG ACCAGATAGC TGGCAATATA
TTTTACACCC GCGTATTGCT AAAAGCCTAT GTAATAGAAG TAAACTACGA AAAAAGCTTC
GAATCGGAAG TGACTCAACG CTGCCATGCA GCATTTGCTC AAAACGGTAT TAAGCACCCG
CAAGGGGTGT ACTAA
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| Protein sequence | MSSDAYQIFS AFDFSRISLS VIILVVAFVL ARSCKIFSNR LSRGFPDYRL RIEQVMTTVN
FILIVGSIAL AIFLLFRSKE AAFAIAGSIG LAFAIGAKDV AASLLSGLIV LFDRSFRVGD
RVKFADIYGD VLAIGVRSTR IRTLDDSIVT VPNSQFMNSP VISANAGALD MQVEVELFVS
PDSDLALVEQ LVRESAIASR SIYLHKPIKV LFKDQIAGNI FYTRVLLKAY VIEVNYEKSF
ESEVTQRCHA AFAQNGIKHP QGVY
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