| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2881 |
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| Symbol | |
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| ID | 3968107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3649854 |
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| End bp | 3651164 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921978 |
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| Product | putative two-component sensor |
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| Protein accession | YP_528350 |
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| Protein GI | 90022523 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0738997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00159828 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAACGA ATCTAACCTT TAATCAAACC CTAAGCGGTA ACCGCCGTTT AATTTTAAAG
CGGTTATTGG TGTTACGTGC TGCCCTGCTG TGCGCGGTAG TAGTGGCGTT ATTGTCGTTT
ACTTTTTTAG TGGATGTGAG AATACACACT GCAGCATACT TACTGCCCTT GGTGGGGTTT
GGCTTTTGTG GCTACTGGGT GGCGCGTTAC CGAAAAGGGG CTAGCGTTAC CGATGCTAAC
TTATTGCGTC AGCTTGTGTT TGATGCCGTA TTTTTGCTGG TGCTTATTTA TTTTACTGGC
GGCGCCACTA ACCCGTTTAT TTACTATTTA TTGGTGCTCG TAGCTATAAG TGCGGCCATT
TTCAACTCGA TAATTGGCTG GTTGTTTAGC GCGGGCTGTA TGCTTGCCTA CACGTTTATT
ATGTTTACCG ATGTGCGTGA GCATGTTCAT CATATGTCTT CAGATTTTCA GCTTCATTTA
CTTGGCATGT GGGTGAATTT TGTTGGCAGT GCTGTACTTA TTTGTTTTTT TGTTTCGCGC
TTAGCTACGG CGTTGCGCGA TAGGCAAATT GAGCTTTCGA AGGTGCGAGA AGAAACATTA
AAAAACGAAC AGTTGGTGGG TATTGGTACT TTGGCTGCGT CTACCGTGCA TGCGCTGGGT
ACGCCGCTTT CTACCATGGC GGTAGTGCTT GGGGAAATGC AACACAGTTA TAAACAGGGC
GCCGCCAAAT GGGATGCGAG TAGCCAGAAC GAAAATGTAG AATTAATGCT GGGGCAAATA
GAGCGCTGTA AAAAAACGTT GAGTAAGCTT AGCTTGTTAT CGCAGCAACA GCAGGATGGT
GGCAGTCTCG AAAATATTGC TGAATTCAGT GATGAGCTTA GAGAGCATTA TTTATTAGCA
AACCCTCGTA TTATGCCTGC CATAGTGTTT AGTAATGAAC AGCACTTTAG TGAATTTTTT
ATAGAGCAAA GTGTGTTGTT TCGCCACGCG GTAATTAATT TAGTTGATAA TGCAATTCAA
GCCGCGGTTA GGCAAGTGAA GGTGTGCTTA GAAGTAGATG CTAAAAGTAA GATTTTGACA
ATTGATATTG AAGACGATGG CAATGGTCTA CCTAGCGATA TAGAGGAACA ATGGGGTAAG
CCGGTAATAT CGCAGAAAGA AAGCGGCATG GGCATTGGTA TTTTTTTGTC TAACTCCACG
GTTGAAAAAC TGGGTGGAAA GGTACAGGTT AAGCGCAAGC CGCAGGTTAC TCAGGTAAGT
ATTAAACTGC CGGTAACATG GGCCAAGCCT GCAGGCGAGG AGCGAGCATG A
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| Protein sequence | MQTNLTFNQT LSGNRRLILK RLLVLRAALL CAVVVALLSF TFLVDVRIHT AAYLLPLVGF
GFCGYWVARY RKGASVTDAN LLRQLVFDAV FLLVLIYFTG GATNPFIYYL LVLVAISAAI
FNSIIGWLFS AGCMLAYTFI MFTDVREHVH HMSSDFQLHL LGMWVNFVGS AVLICFFVSR
LATALRDRQI ELSKVREETL KNEQLVGIGT LAASTVHALG TPLSTMAVVL GEMQHSYKQG
AAKWDASSQN ENVELMLGQI ERCKKTLSKL SLLSQQQQDG GSLENIAEFS DELREHYLLA
NPRIMPAIVF SNEQHFSEFF IEQSVLFRHA VINLVDNAIQ AAVRQVKVCL EVDAKSKILT
IDIEDDGNGL PSDIEEQWGK PVISQKESGM GIGIFLSNST VEKLGGKVQV KRKPQVTQVS
IKLPVTWAKP AGEERA
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