| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2880 |
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| Symbol | |
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| ID | 3968106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3649321 |
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| End bp | 3649857 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637921977 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_528349 |
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| Protein GI | 90022522 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00796825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00113729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCAAA AGTTACTCTA TATAGAAGAC GACGCAGCGC TGGCGATGGT AACTACACGT
GCTCTCACCG CGCGCGGGTT TAACGTAGCG TATTTTCCGG CAGTAAATGC GGTCGACGTG
GAGTTACAAG AATTTACTAT GGCGCTGTTG GATTTAAAGC TAGAAGAGGG CTTATCCCTA
CCGTTTATTC AACAGCTGCT AGCGGCAAAC CCCACCATTA AAATAGTGGT ACTTACCGGC
TACGCCAGCA TTGCGACGGC CGTGCAAGCT ATTAAGCTTG GGGCGACAAA CTACTTAGCG
AAGCCTGCCA CAATAGATCA AATATTACTG GCGTTTGAGG GGAGTGCAGA AAGCGCTCCA
GCGCCCATAG ATAAAGGCGA AGATATAGAA AACATGTCGC TGCGCCGCTT GGAATGGGAG
CATATTCAGC AGGCGCTTGC CGAAAATAAT GGCAATATAT CGGCTACCGC GCGCCAGCTT
AAAATGCATA GGCGCACATT GCAGCGCAAG TTAGCTAAAA AGCCCGTGGC AGAGTAG
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| Protein sequence | MIQKLLYIED DAALAMVTTR ALTARGFNVA YFPAVNAVDV ELQEFTMALL DLKLEEGLSL
PFIQQLLAAN PTIKIVVLTG YASIATAVQA IKLGATNYLA KPATIDQILL AFEGSAESAP
APIDKGEDIE NMSLRRLEWE HIQQALAENN GNISATARQL KMHRRTLQRK LAKKPVAE
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