| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2867 |
|---|
| Symbol | |
|---|
| ID | 3968132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 3627530 |
|---|
| End bp | 3628453 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637921964 |
|---|
| Product | glutaminase |
|---|
| Protein accession | YP_528336 |
|---|
| Protein GI | 90022509 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2066] Glutaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.705763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGCAA TAGATTATAA AAAAATATTC AGTGAAATTG TTAATGAGCT GAGTAGTGAA
GATGAAAAGG GCAGCGTGGC AACTTATATT CCCGAGTTAG CCAATGTAGA CCCGAACAAG
CTTGGCATGC ACCTAACCAC AGTTACTAAT CAACACTTTG CCTACGGCGA TGCTGAGGAA
GCGTTTTCGA TTCAAAGTAT CGCCAAGGTT TGGTCGCTTA CTTTGGCGTT GAAACACTTG
GGTGCAGATA CTTGGCAAAG GGTGGGCGTA GAGCCATCGG GTACGGCGTT TAATTCATTA
GTGCAGCTTG AATATGAAAT GGGTATTCCG CGTAACCCCT TTATTAATGC TGGGGCAATT
GTGGTTTGCG ATATTTTAGT GTCTTGCCTT AAAAACCCTA AAGAAGATTT ACTTGATTTT
ATTCGCACCT CCTCGGGTAT TCCTAGTATT GAATACTGCC CTGTTATTGC CGAGTCGGAA
GTAAAAACCG GCCATAGAAA TTACGCGCTA GCCCACATGA TGAAAGGCTT TGGCAATATT
CATAACGATG TAGATTGTGT GCTAGATCTC TATTTTTCGC TTTGCTCAAT AAAACTCACC
TGCAAACAGC TCGCGCAAGC ATTCTTATTT TTAGCTGCGG GTGGAGTAAA CCCCGCTACC
CAGCAGCAAG TTATTACTCC CAAACGCACA AAACGCATTA ATTCCATAAT GCAAATGTGT
GGCTTCTACG ATGAGGCCGG GGAGTTTGCT TTTAAGGTGG GGCTGCCTGG TAAAAGCGGT
GTAGGTGGCG GCATTGTAGC CGTACATCCT GGTAAATATT GCATCGCGGT GTTTAGCCCG
CGGCTTAACG CCTCGGGTAA TTCTGTTAAG GCAATGAAAG TGCTCGAAGC GCTAACTACT
AAAACAGAAT TGTCTATATT TTAA
|
|---|
| Protein sequence | MDAIDYKKIF SEIVNELSSE DEKGSVATYI PELANVDPNK LGMHLTTVTN QHFAYGDAEE
AFSIQSIAKV WSLTLALKHL GADTWQRVGV EPSGTAFNSL VQLEYEMGIP RNPFINAGAI
VVCDILVSCL KNPKEDLLDF IRTSSGIPSI EYCPVIAESE VKTGHRNYAL AHMMKGFGNI
HNDVDCVLDL YFSLCSIKLT CKQLAQAFLF LAAGGVNPAT QQQVITPKRT KRINSIMQMC
GFYDEAGEFA FKVGLPGKSG VGGGIVAVHP GKYCIAVFSP RLNASGNSVK AMKVLEALTT
KTELSIF
|
|---|
| |