| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2866 |
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| Symbol | |
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| ID | 3968131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3626029 |
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| End bp | 3627018 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637921963 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_528335 |
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| Protein GI | 90022508 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.868675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.72546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAG GTCTTTTTAG CAGTAAAAAG TACGATAAAG TTGTTTTTCA TCAAATAAAC
TCTGGGCAAC ATGAAATAAC TTATCACCCT GTTAGGCTCA ACAAAGATAC GGTGAAGTTA
GCAAGCGGAT TTGAAGCTAT ATGCTGCTTC GTTAATGATG AGATTGACGC CTCTGTGATC
GCAAGCCTAA GCAACATGAA TGTAAAGCTG CTTGCCCTGC GATGCGCCGG TTTTAATAAT
GTTGATTTAC CTGCCGCGAA AGCCAATAAC TTGCCTATTT GCCGAGTACC AGAATATTCG
CCCCACGCCG TAGCGGAGCA TACTTGCGCA CTAATATTAG ATTTAAACCG TAACATCCAC
CGCGCTCATA ATCGCATACG GGAAAACGAT TACTCTTTGG ACGGGCTTTT GGGTTTCGAC
TTACATGGAA AAACGGTGGG AGTGATTGGG GCGGGTAAGA TTGGTCGTGC CTTTATCAAA
ATCATGCTTG GTTTTGGTTG TAACATACAA GTGTGTGACC CCGATTATGC CCAGCCGGAC
AATCCCAAAA TAAAAAAAGG GGACTTGGAT GACGTGCTGC AAAACTCGAA CATTATTTCG
CTACACTGCC CGTTGGTGCC AAGTACACAT CACATGATCA ACCAAGCGGC CATAGATAAA
ATGAAACCAG GTGTAATGTT AATTAATACG AGCAGAGGGG GATTAGTGGA TACCTCGGCG
GTTATACGTG CATTAAAGAA CAAAAAAATA GGTCATTTGG GGTTGGATGT ATACGAAGAA
GAAAGTGAAA TGTTTTTTGA AGACTTTTCT GACACCTTCA TTCAAGACGA TGTATTTGCC
CGCCTACAGA CTTTCCCTAA TGTAACCATT ACAGGCCATC AAGCATTTTT CACCAAAGAG
GCTTTAGAAA AAATAGCCCG TACAACCTTA ACTAACATCG AGCACTTTCA GCGCGGCGAG
TTTGATAAAG TTCATTTTGT TTCCACTTAA
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| Protein sequence | MKIGLFSSKK YDKVVFHQIN SGQHEITYHP VRLNKDTVKL ASGFEAICCF VNDEIDASVI
ASLSNMNVKL LALRCAGFNN VDLPAAKANN LPICRVPEYS PHAVAEHTCA LILDLNRNIH
RAHNRIREND YSLDGLLGFD LHGKTVGVIG AGKIGRAFIK IMLGFGCNIQ VCDPDYAQPD
NPKIKKGDLD DVLQNSNIIS LHCPLVPSTH HMINQAAIDK MKPGVMLINT SRGGLVDTSA
VIRALKNKKI GHLGLDVYEE ESEMFFEDFS DTFIQDDVFA RLQTFPNVTI TGHQAFFTKE
ALEKIARTTL TNIEHFQRGE FDKVHFVST
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