| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2865 |
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| Symbol | |
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| ID | 3968130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3624248 |
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| End bp | 3625864 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921962 |
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| Product | Elongator protein 3/MiaB/NifB |
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| Protein accession | YP_528334 |
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| Protein GI | 90022507 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.689167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.783414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAT TGCAACTACT AACCGCGCTT ACACCCATTG CCTCTATATT TTTATTCTTA
GTGGTTTTTC GCATGCCTGC TGTAAAAGCC ATGCCGTTGT GCTTTGCTGT ATTCGCATTT
CTTGCCTGGA GTACATGGGG GATACACCTA AAACAAATGG CCGCTGCCAC CCTCGAGGGT
TGGGTAATAG CCCTTTCTAT TTTGATTATT ATTTCTGGCG CACTATTGTT ATTAAATGTT
TTAAGAGCAT GTGGAGCATT AGATAGCATC CGAAGCGGCT TTTTTGGCAT CTCACCAGAT
AGGCGCGTAC AGGCCATTAT CATCGCGTGG TTTTTTGGTG CCTTTCTAGA AGGGGCTGGG
GGCTTTGGTA CGCCGGCAGC TATTGTAGCC CCGCTTCTTG TTGTTTTAGG GTTTCCATCT
TTGGCCGCTG TTGCGCTGGC GTTAATTGCA GACAGTGCGC CAGTTTCATT TGGTGCCATT
GGAACACCGG TTCTCGTCGG TATTGGTCAG GGTGTACCAG GCATTGAGTA TGCGGAGTTA
CGGACTATCG CTGTAACAGC AATGTCTATC GATTTTTTTG TCGCAAGCTT TATTCCATTA
ATGATGACGC TATTACTTAC TCGTCTTTTT GGTGCAAACA AAAGCTGGCG TGAGGGTTTT
CAGATATGGC CGTTCGCGCT TCTCTCTGGG GTAATGTTTA CCGCACCCGC TTGGCTAGTA
GCAAAATATA TTGGCGTTGA ATTTCCGTCC TTAATAGGGG CTTTAATAGG CATGCTCATT
ATGGTTTTTG TTGCAAGGCA CGGCTGGTTA CTGCCAAAGC AACCTTGGCG ATTTGCTACC
GACCCGCCCC TAAGCGAACT GACTGAAGTA AATCATTCCG CTGCGGTTAT CCCCCTGTGG
CAGGCTTGGT TGCTCTATGT AAGCGCAGCG TTGTTGCTTG TGCTTAGCCG GCTATCAATG
TTGCCGCTAA AATCGGCTTT ACTGTCTTTT CAATGGCTCT GGGCAAATAT TCTTGGCACG
AACATTTCAA GCAGCCTAGC ACCGCTTTAT TTACCGGGTA CCTTGTTTGC CTTTGTTGCT
TGTGTAACCT GTATTGTATT TAAAACATCT AAACAGCAAA CCCTTTATGC CGTTAAAAAA
ACAGTAGAAA GCCTATGGCC GGCTGCTATC GCGCTGGGTA GTTCCGTACC AATGGTGCGT
ATATTCATCC ATTCTGGAGT GAACGACAAT AGTTTAAATG CCATGCCAAC AGAATTAGCT
AACCAAGCCG TAGATGGCTT GCAAGCACAC TGGCCATTCT TCGCTCCGTT AATAGGCGCC
TTGGGCAGCT TTGTCGCAGG ATCGTCTACT TTTTCAAATA TGATGTTTTC TGGTCTGCAA
ATGGAAGCGG CAGAGGCATT AAACCTTTCA CCTTCGTTGA TTTTGGCCTT GCAACTACTG
GGCTCTAACG CGGGCAATAT GGTGTGCGTG ATGAATGTGG TGGCCGCAGC GGCCGTTGTG
CACCTAACAG GAAAAGAAGG CCACATAATA CGACTAACTT TCGGCCCAAT GCTTATTTAT
TGTGGAGCCG TTGGCGTAGT TGGTTGGCTT GTTAGTCGTA TATTTCCATT TACTTAA
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| Protein sequence | MSLLQLLTAL TPIASIFLFL VVFRMPAVKA MPLCFAVFAF LAWSTWGIHL KQMAAATLEG
WVIALSILII ISGALLLLNV LRACGALDSI RSGFFGISPD RRVQAIIIAW FFGAFLEGAG
GFGTPAAIVA PLLVVLGFPS LAAVALALIA DSAPVSFGAI GTPVLVGIGQ GVPGIEYAEL
RTIAVTAMSI DFFVASFIPL MMTLLLTRLF GANKSWREGF QIWPFALLSG VMFTAPAWLV
AKYIGVEFPS LIGALIGMLI MVFVARHGWL LPKQPWRFAT DPPLSELTEV NHSAAVIPLW
QAWLLYVSAA LLLVLSRLSM LPLKSALLSF QWLWANILGT NISSSLAPLY LPGTLFAFVA
CVTCIVFKTS KQQTLYAVKK TVESLWPAAI ALGSSVPMVR IFIHSGVNDN SLNAMPTELA
NQAVDGLQAH WPFFAPLIGA LGSFVAGSST FSNMMFSGLQ MEAAEALNLS PSLILALQLL
GSNAGNMVCV MNVVAAAAVV HLTGKEGHII RLTFGPMLIY CGAVGVVGWL VSRIFPFT
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