| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2857 |
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| Symbol | |
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| ID | 3968122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3612913 |
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| End bp | 3616539 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921954 |
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| Product | hypothetical protein |
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| Protein accession | YP_528326 |
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| Protein GI | 90022499 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.145348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCT CGTTTACACC TCAACTGCGA AACATGCTCG CATCAGCGGC ATTTATTCCG
CTGCTATTTA GCGCAAATCA AGTACTAGCG GACGAAACCG TTCAAGCCAC ACCTCAGTGG
AAAATAAATT GGTGCGAAAA GCTCGCCCAA AAAGACACGC GCTTAGCCCG CATAATTAGC
CACTATTTGC GTTGCGATAG CATTGTAAAA ACCAATACAG CTCCCACTGC AGTAGCAAGT
GCGCCGCAGG TTAGCAGTGA TAGCAGCTAT ATCACTTTAG ATGGTACAAG CTCTAGCGAC
CCAGATGGCG ATACGCTTAG CTACCAATGG ACACAACTAG CAGGCGCAGA TGCCATAGTT
GTAAGCAGCC TAACCTCGGC CACACCCACT TTTTATATAC CAACAGGTAG CGCAGGTGAT
GGTCTTGTAT TTGAGTTAGT TGTAAGCGAT GGTGAGCTTA GCAATAGCAC AGAAGTTGTT
ATTGACGTGC CCTATTGTAA CGATGCCGAA GGCGAAGTAT TTAACGAATG TGTCGACCCA
GACTGGGCGG GCATTAGCGC GTGGGAAATG CTAAACGACG GCACCTATGA AAACTACCAC
TACACCAGTG GCCACAACAA CTACCAAGCC AATTGGCAGG TGGTAGATAG CGGTGAAGCC
CCCTACGGCA ATGTAATTGA TGTGCAATAC GCGGAAGGCC ACAACGCCTA TTCCATGGTA
CGCATTTATA ACCGCTATGG CGCAGGTAGC ACAGCGGATA TGGCAGCGTA TCAATACGGT
CATATCGAAT TCGACCTACG CGTGCTGGAT TGGGGCAACC AACAGCCCAC AGGCTTAGAA
GTGATTATCG AATGTGTATA CCCCTGCACT AGCGCAGCCT ACCCTGTAGA CGCTGGCGAC
ATTGGCGAAT GGCGTAAAAT CACCATGCCG CTAGAATATT TCATCAACAC AGGCTTAGAC
ATTTACAACG TCGAAATGGG CTTTCAAATA TCGCCTCAAT GGGGCGCACA AGCTGGCGTG
CATTTTCAAG TGGATAATGT GCGCTGGGTA GAAGGCGAAG CACCGCCTGT AGACACAAGT
TACTTTTTAT ATAGCTTTGA TGAACCAGAA AGCATAGACG CCTGGCAAGC TTGGTTTGCC
AATAATAATG GATCGACGCC CAATAAAAGC TTTGAAAACG GCGCACTTGC TTTTAGCCCT
ACATGGGTAA GCGAGAATGA TTACTTTAAT CACGTTGTTG ATTTAGGTGG GGCATACGAC
CTTAGCCGCG CACGCCTTAG CGCCGATGTT TTACTACCAG AAGAGTATTT CCCTAATTTT
GAAGTTGGCT TGAGTTTATT TTTGCTAGAT AGCAACGGCA TTTATGCCTC TGGTAATTTC
TATGGCCCCT GGGACCCAGC TGTACCAGGT CAATTCTTTA ATGCCGAATT TTACAATGCA
GAGTTTGGCA TAAGTTCAAG CGAAGAGAAT TTTGATATAA CCCAAGTCAC GCACATTGGC
ATAGGTATTT ATGCTATTAG CGGGCTTCCA TCCTCTTCCA GCACAATATT ATTCGACAAT
ATTGAACTAA ATTTAAACCA CCTAGGCGAA CCACCTGTAA ACGTAGACCT AGGCAATCCG
CCACCAGAAG CAGTAGATAA CTACGAACTT AGTTACCTTA TTTATACCAG TGGCGGTGCG
CCAGATTACG ACATGGTGTT CGACTATGAA CCGACCGGCA ACGGCTTTTA TATTCGACCT
TACTGGCAGC AAGATGAATT CGCCGTTGGT GTTATGCTTA ATCGCCCAGA AACCTTTAAC
TTTACCGATG GCGAATTAAC TGTAGATGTA TTTGTACCCC AACAAGCAGT CGCTACCGAT
GGGGCAATAG AGCTCGAAAT GGATGATGCC TACGGCAACT TCGCCAAAGT TCAACTGCAA
TCATTTAGCA CTTTAACCAA TAGCGGCTGG CTAACCTTAA CCCTCTCACC AATAAACTAC
GCCACCATAG GCGCCCCTGC TCACTTCGAC GTAACTAAAA TTACACGCGT GCGCTTACTT
ATTACACGCG GCAGCGCAGC AGAAGGTAGT TTTGGCGAAT TTATTGTTAA CAACCTTCAC
CTAGCCCCGG GTATCGATTT TACTAATGGC GGTAACAGTG GCGGTGATAA CGGAGGTACT
GGCGGCGACG GGCTTACGTT TTTACCCTTC GATGAATTCG GCTGGGTAGC AAATAATTGG
AGCGGTGACT CACCCTTAGA TTGGTATCAA AACGGCAATA ACATAAGTGT ACAATTTTCG
ACTATTAAAG CCGACGATCG CATGGCACTT ATCAATTATT TACCCCATAC CATCAATCTA
ACCAATGGCG CTTTTGTTGG TGAAGTGTAT GTACCCAGTG AGCTATTCAA CAGCCTGCAA
TACATTGATG TATTTGTATT CGACGAAGAT TACAACTACG CAAGTATACA CTTTGCAGAT
AGCTACGCTC TGGTAGTAGA TGGCGAAACA AATCTCGCTC GATTTGAACT TAACGCAGAT
ACCCTTTCAA ATTACGACAT ACAATTAGAT CGTATCCACG CGTTAGGCCT ACATTTTTAC
TTTGTTAACG ATCAAACAGG CATAACCGAA ACGATTGAGT TCACCAACTT AGGCTTGCGG
TACGACCCAA GCTTACCAAT AGGCAATGGC GAACCAAGTG TGGATTTCTC GGAATGGGGT
GTGGGCGCTT ATAACGGTGA ACCCGGCGCT TCGTTTTATG CCAGTGGCGA CACCTTTTAT
GTTACCCCAA GATGGTATGC GGAGGACGAT CAACTAGCAA TTGGCCCAGA CTTCTATTCG
CCCATTGATG TGAAATACGG GCAGCTATCT TTAGAAGTGT TTATTCCTGA AGCAGCGGCA
AACTCACCAG CCACCATGAC ATTTTTCGCA CAGGATGTGC ACGGCAATCG CGCCAGCACA
CACCCCATGG CGCTAAATAT GTATGGCGGT GCTTTTTGGC ACACTATTTT TATAGCACCA
TTTAGCGCCG AAGCGTTTGC AAACGCAGAC CCCGCTTTCG ACGCCTCGCA GTTAGCCAGC
TTTGATGTTG TAATCGCAGC CAACGGCAGC CCTCTAGGGG AAGCCGGTGA ATTTGCTATC
CGCAATTTAA TATACATGGC TGGAGACCCG CCCCCAGGTA ACGAAAATCT TATAGAGAAT
ATGTTTGTAT TTTCAACCCA AGGCGCAGCG CAACCCAGCT GGTACTTTGT AGGCGAATCG
CTTGCGGTTA TACCTAGCTG GCAAAGTGCA GAAGATATTA TTACCGCTCA GGCAAGCTTG
CCGACTCTTG CTAACCTGCT TTACGGCGGC GCCAGCTTCG ATATTTTCGC CCCAGCAGAA
TATTCGCAAA GCAACTTAAG TGCACGCCTT GTATTTTTTG ATATAAATTA TCAAACAGCA
ACCACACAAT GGGTAGAGCT AAATACGCAA TCAGGTAACT GGCAAACTAT TGCGGTAGAT
AATATTAGCC ACCATAGCTT TGCAGACCAA CACGTTGATT TTGACGCAAC GCTTGTCACA
CAGGTGAATA TAGAGTTCGC AGCAAACGGC AACCTACCAC CGCAAGCGGA TATAGAAATA
GCAAATGGAA GGCTTATAAG TAATTAA
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| Protein sequence | MTLSFTPQLR NMLASAAFIP LLFSANQVLA DETVQATPQW KINWCEKLAQ KDTRLARIIS
HYLRCDSIVK TNTAPTAVAS APQVSSDSSY ITLDGTSSSD PDGDTLSYQW TQLAGADAIV
VSSLTSATPT FYIPTGSAGD GLVFELVVSD GELSNSTEVV IDVPYCNDAE GEVFNECVDP
DWAGISAWEM LNDGTYENYH YTSGHNNYQA NWQVVDSGEA PYGNVIDVQY AEGHNAYSMV
RIYNRYGAGS TADMAAYQYG HIEFDLRVLD WGNQQPTGLE VIIECVYPCT SAAYPVDAGD
IGEWRKITMP LEYFINTGLD IYNVEMGFQI SPQWGAQAGV HFQVDNVRWV EGEAPPVDTS
YFLYSFDEPE SIDAWQAWFA NNNGSTPNKS FENGALAFSP TWVSENDYFN HVVDLGGAYD
LSRARLSADV LLPEEYFPNF EVGLSLFLLD SNGIYASGNF YGPWDPAVPG QFFNAEFYNA
EFGISSSEEN FDITQVTHIG IGIYAISGLP SSSSTILFDN IELNLNHLGE PPVNVDLGNP
PPEAVDNYEL SYLIYTSGGA PDYDMVFDYE PTGNGFYIRP YWQQDEFAVG VMLNRPETFN
FTDGELTVDV FVPQQAVATD GAIELEMDDA YGNFAKVQLQ SFSTLTNSGW LTLTLSPINY
ATIGAPAHFD VTKITRVRLL ITRGSAAEGS FGEFIVNNLH LAPGIDFTNG GNSGGDNGGT
GGDGLTFLPF DEFGWVANNW SGDSPLDWYQ NGNNISVQFS TIKADDRMAL INYLPHTINL
TNGAFVGEVY VPSELFNSLQ YIDVFVFDED YNYASIHFAD SYALVVDGET NLARFELNAD
TLSNYDIQLD RIHALGLHFY FVNDQTGITE TIEFTNLGLR YDPSLPIGNG EPSVDFSEWG
VGAYNGEPGA SFYASGDTFY VTPRWYAEDD QLAIGPDFYS PIDVKYGQLS LEVFIPEAAA
NSPATMTFFA QDVHGNRAST HPMALNMYGG AFWHTIFIAP FSAEAFANAD PAFDASQLAS
FDVVIAANGS PLGEAGEFAI RNLIYMAGDP PPGNENLIEN MFVFSTQGAA QPSWYFVGES
LAVIPSWQSA EDIITAQASL PTLANLLYGG ASFDIFAPAE YSQSNLSARL VFFDINYQTA
TTQWVELNTQ SGNWQTIAVD NISHHSFADQ HVDFDATLVT QVNIEFAANG NLPPQADIEI
ANGRLISN
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