| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2853 |
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| Symbol | |
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| ID | 3968118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3607571 |
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| End bp | 3609829 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921950 |
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| Product | isoquinoline 1-oxidoreductase, beta subunit, putative |
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| Protein accession | YP_528322 |
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| Protein GI | 90022495 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.292971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAA TTATTAATGT TAATCGACGC CGGTTTTTAA AAGCCACTGG TGTAGCGGGC
GGTGCATTTA TTTTGGGGGC TGCAATACCA GGGCTAAGTA TCGCAGCGGG TAATAATGCA
CACCAAGCAA GTGCCGAGCT AGGGGTGTTT GTGAGTATAG AATCCAACGG TGCCGTAAAA
ATATTTTGTC ATCGAATGGA AATGGGCCAG GGCATATTAA CCAGCGTGCC GCAAATAATC
GCCGATGAGT TGGAAGCCGA TTGGCAAAAA GTAACTGCGC AATTGGCACC GGGCGACAGT
AAATTTGGCG ATCAAAGCAC CGGCGGTTCG GCTTCTATTC GTCGCTTTTT TACCTATACG
CGACAAATGG GCGCAATAGC GCGCGATATG CTTGAGCAAG CGGCAGCCAA TGCCTGGCAA
GTAGATAAAA CGGCGGTTAA AGCGCAAAAG CATTATGTGG TGCATACCGC GACGGGTAAA
AAATTAGGTT TTGGTGAGTT GGCAAGTGCT GCGGCAAAAC TACCTGTACC CGATAGAGAA
AGCGTAAAAC TAAAAGCGAA CAAAGATTTC TCGCTTATAG GTAAAGACGT AGCCCTACAG
GGGCAGGCCG ATATTGTGCA AGGCAAGGCA ACATACGCGC ACGATATACA GCTACCTAAT
ATGCTTATTG CCAGCATACA GCGACCACCA GTATTGTTAG GTAAGGTGAA AAGCTTTGAT
GCAACCGAAG CAAAAAAAGT AGCGGGTGTG GTGGATGTAA TTCAGTTGCG AGATAGAAGC
TTACCCGTGT TAACGAATCC AGTTTCAGGT GTTGCTGTAT TAGCAACCAA TACCTGGGCA
GCATTAGAAG GCCGCAAGAA ACTAAAAATA GAGTGGGACT TGGGCGAAAA CGTAAGTCAC
AATTCCGACG CCTATATGCA AGATCTTGTT AAGAAAGTGA GCGAAAAAGG TATTTCTGTT
CGCACAGAAG GTGACGTGTA CAGCCATGCT TATAATGCCG AGCGCACCGT AGAGGCGGTA
TACACTTTTC CATATCATCA CCATATGTCT ATGGAAACGC CTGCTGCAAC TGCCGTTATT
GAAAATGGTA TTTGCACTGT TTGGGCTGGT ACTCAAACAC CGCAATGGGG TAAAGGCATG
GTGTTTCAAG AGCTAGGCCT CGACCCAGAA AAAGATGCCG ACAAAGTTGT TTTTAACACT
ACATTAATGG GTGGCGCTTT TGGTCGCAAA GGTAAAAATG ACTTTACTAT TGAAGCTGTA
GAGCTGGCCA AAGCGAGTGG CCGCCCAGTT AAAGTTGTTT GGAGCAGGGA AGATGACGTT
AAGCACGGTT TTTATCACTC CCCTTCGGCC AATTATTACA AGGCAGAATT AACAAAAGAT
AATCGTGCCG AGTATGTGAT TGCACGTGTT GCGCACCCGC CAATAGGGTG GATTTTTAAT
CACCAAACCG ATACCCCCGG TAACATGTTG TTGTCGCAAA GTTTTGGCGA CTTACCTTTC
GCTGTGGATC ACCTAAGCGT AGAAACACAA AAAGTGTCTA CACATCTTCG CATAGGGTGG
TTTCGCGCGG TACAGAATAT TCACAATGCC TTTGCTATGG GCTGTTTTGT TGATGAGCTG
GCCGCAAAAG CAAAAATTAG CACGCGCAAA ATGTGGATGA ACTTGCTGGG CGACGATCGC
ATTGTAAACC CTGCGCAAGA GGGCTTTGAC GGCTGGGTGA ACTATGGCCA ATCTACCCCC
GCATACGCAG TAAACACTAA ACGTATGAAA AACGTAATTA ACCTTATTGC GGATAAGGCG
GGTATTGATA AAAAATTACC CGCTAACGAA GGTTGGGGTA TTGGCTACGC CACAAGCTTT
AACTCTTACG CTGCAGCCGC AACTAAAGTG CGTGTGGTGG AAGACAAAGT TGAAGTGTTG
GAAATGCACA CGGTAATAGA CTGCGGCTTA GTAGTTACAC CCGATAGAGT GAAATCGCAA
ATGGAAGGCG CCATGATTAT GGGGCACTCG TTAGCTTTGT TTAGCGCAAT TACGGTGAAA
GATGGTGAAG TGGAGCAAAG TAATTTTCAC GATTATTCTG TTTCGCGAAT TAATCAAATT
CCGCCGTTAT TTGTACACTT AGTCGAATCG GATGAGGCGC CAGGTGGTGT AGGCGAGCCA
GGTTTGCCAG CTGTGGTACC GAGTATTGTA AACGCTATTT ACCATGCTAG CGGCAAACGC
ATTAGAGATT TACCTGTAAA TAAAGTGCTT AAAGTTTAG
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| Protein sequence | MSQIINVNRR RFLKATGVAG GAFILGAAIP GLSIAAGNNA HQASAELGVF VSIESNGAVK
IFCHRMEMGQ GILTSVPQII ADELEADWQK VTAQLAPGDS KFGDQSTGGS ASIRRFFTYT
RQMGAIARDM LEQAAANAWQ VDKTAVKAQK HYVVHTATGK KLGFGELASA AAKLPVPDRE
SVKLKANKDF SLIGKDVALQ GQADIVQGKA TYAHDIQLPN MLIASIQRPP VLLGKVKSFD
ATEAKKVAGV VDVIQLRDRS LPVLTNPVSG VAVLATNTWA ALEGRKKLKI EWDLGENVSH
NSDAYMQDLV KKVSEKGISV RTEGDVYSHA YNAERTVEAV YTFPYHHHMS METPAATAVI
ENGICTVWAG TQTPQWGKGM VFQELGLDPE KDADKVVFNT TLMGGAFGRK GKNDFTIEAV
ELAKASGRPV KVVWSREDDV KHGFYHSPSA NYYKAELTKD NRAEYVIARV AHPPIGWIFN
HQTDTPGNML LSQSFGDLPF AVDHLSVETQ KVSTHLRIGW FRAVQNIHNA FAMGCFVDEL
AAKAKISTRK MWMNLLGDDR IVNPAQEGFD GWVNYGQSTP AYAVNTKRMK NVINLIADKA
GIDKKLPANE GWGIGYATSF NSYAAAATKV RVVEDKVEVL EMHTVIDCGL VVTPDRVKSQ
MEGAMIMGHS LALFSAITVK DGEVEQSNFH DYSVSRINQI PPLFVHLVES DEAPGGVGEP
GLPAVVPSIV NAIYHASGKR IRDLPVNKVL KV
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