| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2848 |
|---|
| Symbol | |
|---|
| ID | 3968192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 3602041 |
|---|
| End bp | 3602694 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637921945 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_528317 |
|---|
| Protein GI | 90022490 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3897] Predicted methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.531025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT ACCGTGTGCG CTACCAAACA ATAGAGTTTG GTGATACCGA TATTCATGTG
CGCAGCCTGC GCGACAACCA AGAGTTTAGC GACGACTTTG GCATTGCCGA AAAACTTGGT
ATTTCGTCGT CTACTTGGTC TTTATTTGGC ATTCTTTGGG ATTCAGGCCT AGTGCTTGCC
CACCATATGC ATACAGCATC AACAGAAGGC AAACGCATAT TAGAGTTAGG CTGTGGAATT
GGCCTTGCAA GCTTGGTGTT AAATAGACGC AACCAAGATA TAACCGCCAC CGATTACCAC
CCAGAAGCCC ATGCATTTTT AAACAAAAAC ACAGCGCTTA ATAGCGATGC AGAAATTCCA
TTTTTACGCA CAGGCTGGGC AGATGAAAAA TCTGAACTTG GGCTGTTCGA CATAATTATT
GGCAGCGATA TTTTGTACGA TAACTACCAC GCAGAGTTAG TATCGGAATT TATTGAGCAG
CACGCAAAAC CCCATTGCCA AGTGATTATT GTCGACCCCG GCAGAAAACA AACCGGCAGG
TTTAGCAAAG AAATGGTTAA ACGCGGCTAC ACGTTTGAAA GCCACAAACC AGAAAACTGT
GAATATATTA ACGGCGAATA CAAAGGTAAA ATTTGGTCGT TTACTCGCGT ATAG
|
|---|
| Protein sequence | MSNYRVRYQT IEFGDTDIHV RSLRDNQEFS DDFGIAEKLG ISSSTWSLFG ILWDSGLVLA
HHMHTASTEG KRILELGCGI GLASLVLNRR NQDITATDYH PEAHAFLNKN TALNSDAEIP
FLRTGWADEK SELGLFDIII GSDILYDNYH AELVSEFIEQ HAKPHCQVII VDPGRKQTGR
FSKEMVKRGY TFESHKPENC EYINGEYKGK IWSFTRV
|
|---|
| |