Gene Sde_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2838 
Symbol 
ID3968182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand- 
Start bp3585592 
End bp3586149 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID637921935 
Productputative lipoprotein 
Protein accessionYP_528307 
Protein GI90022480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000947276 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.212389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA TAGCTAAAAA ATTACGACGT GCTCTGGCGT GTACGGCGTT GATAGTACTC 
TTTACCGGGT TAGCAGGGTG CAGTGGTGTA GATGTGAAAA CTTATAAAAA CAACTCGCCA 
CGCCTAGTGT TGCCCCAGTT TTTTAACGGC GAGCTGCACG CTCACGGCAT AGTTAAAAAT 
AGGCAAGGTA AAGTCATTCG CTATTTTAAT GCAAAAATAT TGGCGCATTG GGATGATGCC 
GGTATAGGGC ATTTAGATGA ATACTTTGAG TTTGATGACG GCGAACAACA GCGCAGACAA 
TGGCAATTAC AGCCCGATAG CACGGGTGGC TTTGTAGCAA CCGCGAATGA CACCGTTGGG 
GAGGGGGTAG GCGAAGTTGC CGGCAATGCT TTATTCTTAA ATTACGTGCT AACGGTTCCA 
TACAAAGGTA GCGCTATAAA TGTAAAAGTA GAAGACCGAA TGTATATGGT AAATAAAAAC 
ACGCTTATTA ATGAATCGGT ATTAACCAAA TTTGGCGTGA AAGTGGGGTA TGTGACTTTA 
GTTATTGTGA AGACTTAG
 
Protein sequence
MNEIAKKLRR ALACTALIVL FTGLAGCSGV DVKTYKNNSP RLVLPQFFNG ELHAHGIVKN 
RQGKVIRYFN AKILAHWDDA GIGHLDEYFE FDDGEQQRRQ WQLQPDSTGG FVATANDTVG 
EGVGEVAGNA LFLNYVLTVP YKGSAINVKV EDRMYMVNKN TLINESVLTK FGVKVGYVTL 
VIVKT