| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2830 |
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| Symbol | |
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| ID | 3968174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 3569737 |
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| End bp | 3570465 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637921927 |
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| Product | SapC related protein |
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| Protein accession | YP_528299 |
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| Protein GI | 90022472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.525847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000912858 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGTAGCC ACGTAATTTT AAATAACGTA ACCCATAAAA ACCTAAAAAT TAATACTCAA
CGTAGCGCCA GTTTAGGCGA TGCGGTTGCC TCTGTGCTCA CCTTTCCTTT CGAGTTTCGC
AATATATTAT CCCATTACCC CATTTGCTTT AAAAAAGATG AACAATCCGG CGAGTTTTAT
GCGGCAGCGT TTATGGGGTT TGAAGAAAAT GAAAACTTAT ATTTAACCGA ATCCGGCTGG
CAAGCCAGTT ATATTCCGCT TGTAATAGAG CGCGAGCCAT TTCTAATTGG TTTTCAGGCT
AGCGAACAAG GTGGTGAGCC TGGGCGAATT ATTCATGTGA ATATGGAAAG CCCGAGAATA
AGTACTACCC AAGGTGAACC GGTTTTTTTA CCTATGGGTG GTAACACACC TTACCTAGAG
CGCATAGGGT CTATTTTAGA GGCCATTTAC CAAGGCCAAA AGGGCAGTAA ATTATTTTTT
GACGAGTTAA TTAAGCATGA CCTACTAGAG GCCTTTGAGC TTAGTGTTAC ATTAAATGAT
GGCTCAGAAA ATAAACTGGT AGGTTTTTAT ACCGTGCACG AAGAGCGATT AGAGAATTTA
TCTGGTGCGG CGTTAGAAGC GCTTAGTCGT AGTGGTACAT TGCAGCATGC CTATATGGCA
TTGGCTTCGC TCTCTAATTT TAGTGTACTT ATAGATAGAA AAAACCGACT CTTAGCGGCT
GCTAAATAG
|
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| Protein sequence | MSSHVILNNV THKNLKINTQ RSASLGDAVA SVLTFPFEFR NILSHYPICF KKDEQSGEFY
AAAFMGFEEN ENLYLTESGW QASYIPLVIE REPFLIGFQA SEQGGEPGRI IHVNMESPRI
STTQGEPVFL PMGGNTPYLE RIGSILEAIY QGQKGSKLFF DELIKHDLLE AFELSVTLND
GSENKLVGFY TVHEERLENL SGAALEALSR SGTLQHAYMA LASLSNFSVL IDRKNRLLAA
AK
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