Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2826 |
Symbol | |
ID | 3968229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 3563288 |
End bp | 3564097 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637921923 |
Product | formate/nitrate transporter |
Protein accession | YP_528295 |
Protein GI | 90022468 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2116] Formate/nitrite family of transporters |
TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.189736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00104508 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTATT TAGCCCCCGC GGAATTCGCC ACCAAAATGG TGGATGCCGG TGAATCTAAA GTATTTATGT CCACCCGCGA TACATTAATT CGCGCCTATA TGGCTGGCGC AATATTAGCG TTAGCAGCGG TATTTGCCGT TACCATTGCT GTGCAAACGG GCGTGTTTTT AATTGGTGCA ATTTTGTTCC CCGTTGGTTT TTGTATGCTT TACCTAATGG GGTTCGACCT GTTAACAGGG GTGTTTGTGT TGGCACCGCT TGCTTGGCTG GATAAACGCC CAGGCGTAAC GGTAAAAGGA ATATTGCGCA ACTGGGGGCT TGTGTTTTTA GGTAACTTTG GTGGTGCGCT TACGGTAGCT TTTATGATGG CGTTTATTTT TACTTATGGC TTTAACGTAG AGGCTGGCGC GATTGGTTCT AAAGTTGCGG GTATTGGCGA GGCACGTACG CTAGGTTATG CCGAGCATGG TGTTGCAGGT TGGATAACTA TTTTTATTCG CGGCATGCTG TGTAACTGGA TGGTATCGCT AGGTGTAGTA GGGGCGATGA TTTCTACATC GGTTAGCGGC AAGGTTATAG CAATGTGGAT GCCTATCTTC TTGTTCTTCT TTATGGGCTT TGAGCATTCT GTTGTAAATA TGTTCTTGTT CCCATTTGGT TTAATTATGG GCGGTGAGTT TTCTGTAATG GATTATTTTA TTTGGAACGA AATTCCAACT GCATTGGGTA ACCTTGTGGG TGGCTTGGCA TTTACCGGTT TAACGCTTTA CACCACACAT GTGCGCACGG GTGCAAAACG TACGGCGTAA
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Protein sequence | MSYLAPAEFA TKMVDAGESK VFMSTRDTLI RAYMAGAILA LAAVFAVTIA VQTGVFLIGA ILFPVGFCML YLMGFDLLTG VFVLAPLAWL DKRPGVTVKG ILRNWGLVFL GNFGGALTVA FMMAFIFTYG FNVEAGAIGS KVAGIGEART LGYAEHGVAG WITIFIRGML CNWMVSLGVV GAMISTSVSG KVIAMWMPIF LFFFMGFEHS VVNMFLFPFG LIMGGEFSVM DYFIWNEIPT ALGNLVGGLA FTGLTLYTTH VRTGAKRTA
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