Gene Sde_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2826 
Symbol 
ID3968229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp3563288 
End bp3564097 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content46% 
IMG OID637921923 
Productformate/nitrate transporter 
Protein accessionYP_528295 
Protein GI90022468 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.189736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00104508 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTTATT TAGCCCCCGC GGAATTCGCC ACCAAAATGG TGGATGCCGG TGAATCTAAA 
GTATTTATGT CCACCCGCGA TACATTAATT CGCGCCTATA TGGCTGGCGC AATATTAGCG
TTAGCAGCGG TATTTGCCGT TACCATTGCT GTGCAAACGG GCGTGTTTTT AATTGGTGCA
ATTTTGTTCC CCGTTGGTTT TTGTATGCTT TACCTAATGG GGTTCGACCT GTTAACAGGG
GTGTTTGTGT TGGCACCGCT TGCTTGGCTG GATAAACGCC CAGGCGTAAC GGTAAAAGGA
ATATTGCGCA ACTGGGGGCT TGTGTTTTTA GGTAACTTTG GTGGTGCGCT TACGGTAGCT
TTTATGATGG CGTTTATTTT TACTTATGGC TTTAACGTAG AGGCTGGCGC GATTGGTTCT
AAAGTTGCGG GTATTGGCGA GGCACGTACG CTAGGTTATG CCGAGCATGG TGTTGCAGGT
TGGATAACTA TTTTTATTCG CGGCATGCTG TGTAACTGGA TGGTATCGCT AGGTGTAGTA
GGGGCGATGA TTTCTACATC GGTTAGCGGC AAGGTTATAG CAATGTGGAT GCCTATCTTC
TTGTTCTTCT TTATGGGCTT TGAGCATTCT GTTGTAAATA TGTTCTTGTT CCCATTTGGT
TTAATTATGG GCGGTGAGTT TTCTGTAATG GATTATTTTA TTTGGAACGA AATTCCAACT
GCATTGGGTA ACCTTGTGGG TGGCTTGGCA TTTACCGGTT TAACGCTTTA CACCACACAT
GTGCGCACGG GTGCAAAACG TACGGCGTAA
 
Protein sequence
MSYLAPAEFA TKMVDAGESK VFMSTRDTLI RAYMAGAILA LAAVFAVTIA VQTGVFLIGA 
ILFPVGFCML YLMGFDLLTG VFVLAPLAWL DKRPGVTVKG ILRNWGLVFL GNFGGALTVA
FMMAFIFTYG FNVEAGAIGS KVAGIGEART LGYAEHGVAG WITIFIRGML CNWMVSLGVV
GAMISTSVSG KVIAMWMPIF LFFFMGFEHS VVNMFLFPFG LIMGGEFSVM DYFIWNEIPT
ALGNLVGGLA FTGLTLYTTH VRTGAKRTA