| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2822 |
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| Symbol | |
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| ID | 3968225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 3559635 |
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| End bp | 3560336 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921919 |
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| Product | heat shock protein DnaJ-like |
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| Protein accession | YP_528291 |
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| Protein GI | 90022464 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1720] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000736424 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAATTTA CCCTCAACGC CATAGGCAAA ATTCACACGT GTTATAAGCA AAAGTTTGGT
ATTCCACGCC AAGCGGGGCT TAGCCCCAGT GCAGAAGCGC GCATAGAGAT TTTCGCCCCC
TACAACCGGA TAGAAGCCTT TGAGGAGCTA AAGCAGTCTT CCCATATTTG GGTGCATTTT
GTGTTTCACG AGAACCGCCG TACGGAGTGG AAACCCAAGG TTAAGGCCCC TCGTCTTGGC
GGCAATAAAA CCATTGGCGT ATTTGCCACT CGCTCGCCGG TTAGGCCTAA CCCTATTGGG
CTATCGGCAG TGCGACTAGA GACGATAGAG CATTCGAGTA AGGGGCTATT TTTAGTAATA
CGCGGCGGCG ACTTTTTAGA TGGCACCCCA GTTGTAGATA TAAAACCTTA CGTGCCCTAT
TGCGATAAAA TAGACAACGC AACCAATGGC TTCGCTGCAG ATGCCCCCGC AACCTATGCC
GTACAGTTTG ATGAAGAAAC ACTAAGTAAA ATTCGCGCGA TATCTATCGC CAATTTAGAG
CCGCTAATTA TAGAAACATT GCAGCTTAAC CCCGCCCCAC AATACCAAAC AGCCGATACC
AGTAAAACTT ACGCCTTGCG CCTGTTCGAC TACGATATCC ACTGGCAATT GGCTTCGGTA
AATGCCATTC GGGTAACGGG CATTACTCAA GCAACCATAT GA
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| Protein sequence | MQFTLNAIGK IHTCYKQKFG IPRQAGLSPS AEARIEIFAP YNRIEAFEEL KQSSHIWVHF
VFHENRRTEW KPKVKAPRLG GNKTIGVFAT RSPVRPNPIG LSAVRLETIE HSSKGLFLVI
RGGDFLDGTP VVDIKPYVPY CDKIDNATNG FAADAPATYA VQFDEETLSK IRAISIANLE
PLIIETLQLN PAPQYQTADT SKTYALRLFD YDIHWQLASV NAIRVTGITQ ATI
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